TCONS_00004676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004676-protein
Unique NameTCONS_00004676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004676-protein ID=TCONS_00004676-protein|Name=TCONS_00004676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MEISTDTSVPKPQKVRDVKCFVCSGDSPKYHCPRCGVHYCSLVCYKDSKH
ESCSEAFYKEQVMEELKNMKGSKEDKMKMLKMLQKQQHEQQQNESCDDNL
SQRLAGIHMDDHEGLWENLSEEEKHLFNERLRTGNVDFLITWKPWWKRGS
RTQKLPKLFPEFETCQQLLNVNVNKRVLRPLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002636XLOC_002636Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004676TCONS_00004676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 18..46
e-value: 5.8E-9
score: 35.6
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 20..53
score: 10.446
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 16..51

Blast
[Close]
BLAST of TCONS_00004676-protein vs. Swiss-Prot (Human)
Match: ZNHI2 (Zinc finger HIT domain-containing protein 2 OS=Homo sapiens GN=ZNHIT2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.239e-19
Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 0 
Query:   29 KYHCPRCGVHYCSLVCYKDSKHESCSEAFYKEQVMEELKNMKGSKEDKMKMLKMLQKQQHEQQQNESCDDNLSQRLAGIHMDDHEGLWENLSEEEKHLFNERLRTGNVDFLI-TWKP-WWKRGSRTQKLPKL 158
            +Y CPRC   YCSL CY+   H +C+E FY++QV+ EL+            L+ L++Q+  + ++E  +  LS   +G       GLWE L+  EK  F   L  G    L+  W+P WW RG+  Q L +L
Sbjct:   19 RYTCPRCNAPYCSLRCYR--THGTCAENFYRDQVLGELRGCSAPPSRLASALRRLRQQR--ETEDEPGEAGLS---SGPAPGGLSGLWERLAPGEKAAFERLLSRGEAGRLLPPWRPWWWNRGAGPQLLEEL 143
The following BLAST results are available for this feature:
BLAST of TCONS_00004676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNHI21.239e-1935.61Zinc finger HIT domain-containing protein 2 OS=Hom... [more]
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