TCONS_00004749-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004749-protein
Unique NameTCONS_00004749-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length463

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004749-protein ID=TCONS_00004749-protein|Name=TCONS_00004749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
MLCQCKKNMVSCTVRFCPRVACANPVRKKGTCCKHCPDSRLLLKKRKGCE
YFGSVFDRGSQWTVYIPNSRQNHCLECSCKKKGCRPTYACQRKICPVLRC
REQVNRPGNCCKTCKDDLTSQQQIIGNHQLENIQHDNLYNTQQQHSSSQG
ETFTFFDSLKDDRSLSPSQKDDNEDDDDNDDKCNDENDEEDKTRRPTSQL
TKKPLTVIKITEKPIKPKKTCKEDPKDCDFGKIYKNGESFIPEGFNCLRC
SCKNSNVTCGRVFCPVTYTCKNPRRQKGLCCKICPGTSRSEALKTEERDV
RPLMKPRKSCSRNRKEDRIQVFEYESPTSLLGGRMLNNYFLFDRSQMTPP
GRSEIHSLKFTAPNMVDIAVDQITSDSESFFSKWKYIGSVKTKVLERVHR
HEKNLKSAKSLHRYNNLVKLIKEKAAKGKVHRRGGRCERKSTGEHDTIAN
QELIKTLKEIRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002687XLOC_002687Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004749TCONS_00004749Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001007VWF_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001007VWFC domainSMARTSM00214vwccoord: 49..114
e-value: 0.35
score: 14.6
coord: 228..284
e-value: 0.0018
score: 27.6
IPR001007VWFC domainPFAMPF00093VWCcoord: 231..284
e-value: 3.5E-6
score: 27.1
IPR001007VWFC domainPROSITEPS01208VWFC_1coord: 247..284
IPR001007VWFC domainPROSITEPS50184VWFC_2coord: 219..285
score: 10.635
NoneNo IPR availableGENE3D2.10.70.10coord: 230..262
e-value: 1.2E-7
score: 31.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..205
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 47..117
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 228..287

Blast
[Close]
BLAST of TCONS_00004749-protein vs. Swiss-Prot (Human)
Match: CRDL1 (Chordin-like protein 1 OS=Homo sapiens GN=CHRDL1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.357e-17
Identity = 83/303 (27.39%), Postives = 116/303 (38.28%), Query Frame = 0 
Query:    3 CQCKKNM-VSCTVRFCPRVACANPVRKKGTCCKHCPDSRLLLKKR---KGCEYFGSVFDRGSQWTV--YIPNSRQNHCLECSCKKKGCRPTYACQRKICPVLRCREQVNRPGNCCKTCKDDLTSQQQIIGNHQLENIQHDNL---YNTQQQHSSSQGETFTFFDSLKDDRSLSPSQKDDNEDDDDNDDKCNDENDEEDKTRRPTSQLTKKPLTVIKITEKPIKPKKTCKEDPKDCDFGKIYKNGESFIPE--GFN---CLRCSCKNSNVTCGRVFCPVTYTCKNPRRQKGLCCKICPGTSRSE 291
            C C +N  V C+   CP V C +PV     CC  CPDS   +  +   K CEY G+ +  G  +       N + N C +CSC +        C  K CP L C   V+ P +CC+ C+ D        G    E+   D      N + +HS  +              S  P  +       D                   SQ     +  I I  K  K  + C  +      GK Y +GES+ P    F    C+ C+C  +   C ++ CP  Y CK P++  G CCK+CPG    E
Sbjct:   59 CICSENGNVLCSRVRCPNVHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGTTYQHGELFVAEGLFQNRQPNQCTQCSCSEG----NVYCGLKTCPKLTCAFPVSVPDSCCRVCRGD--------GELSWEHSDGDIFRQPANREARHSYHRSHYDPPPSRQAGGLSRFPGARSHRGALMD-------------------SQQASGTIVQIVINNKH-KHGQVCVSN------GKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPNRYPCKYPQKIDGKCCKVCPGKKAKE 323
The following BLAST results are available for this feature:
BLAST of TCONS_00004749-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRDL11.357e-1727.39Chordin-like protein 1 OS=Homo sapiens GN=CHRDL1 P... [more]
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