TCONS_00004859-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004859-protein
Unique NameTCONS_00004859-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004859-protein ID=TCONS_00004859-protein|Name=TCONS_00004859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
SGSKSPGKPQKRESKTPIIIVPSGTTALISLLNAKDILQDYRFVSVEEKK
RLGTIKENEVMVQRKKDTLINNTMQTVTIPFRIVDQPLKLQPNEWNRVAA
VFVQGPTWQFKGWPHLLPDGSPVDILTKIKGFHVRYDDMKTDANVMKWDV
MVLTFNRNRRHMDRATVLKFWEALEKFLAKNKPNLRF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002752XLOC_002752Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004859TCONS_00004859Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031336CDC73_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031336Cell division control protein 73, C-terminalPFAMPF05179CDC73_Ccoord: 14..177
e-value: 1.1E-47
score: 161.6

Blast
[Close]
BLAST of TCONS_00004859-protein vs. Swiss-Prot (Human)
Match: CDC73 (Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.458e-76
Identity = 104/179 (58.10%), Postives = 142/179 (79.33%), Query Frame = 0 
Query:   10 QKRESKTPIIIVPSGTTALISLLNAKDILQDYRFVSVEEKKRLGTIKENEVMVQRKKDTLI-NNTMQTVTIPFRIVDQPLKLQPNEWNRVAAVFVQGPTWQFKGWPHLLPDGSPVDILTKIKGFHVRYDDMKTDANVMKWDVMVLTFNRNRRHMDRATVLKFWEALEKFLAKNKPNLRF 187
            QK+ S+TPIII+P+ TT+LI++LNAKD+LQD +FV  +EKK+ G  +ENE ++QR+KD +    T  +VT+P+R+VDQPLKL P +W+RV AVFVQGP WQFKGWP LLPDGSPVDI  KIK FH++YD+++ D NV KWDV VL  + ++RH+DR   L+FWE L++++ K+K +LRF
Sbjct:  353 QKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF 531
The following BLAST results are available for this feature:
BLAST of TCONS_00004859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC733.458e-7658.10Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1[more]
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