TCONS_00004863-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004863-protein
Unique NameTCONS_00004863-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length464

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004863-protein ID=TCONS_00004863-protein|Name=TCONS_00004863-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MSKRNSTIKAKTPSDMAAYNVSPGNFWEIGNYTRCCKRITDSNNLCDDLI
KMYTERAEIEAKYSKKLTDWHERWSKHLEASPAVYATMKTAHLGTLKEAH
DRAIIHMDCWTKIHNQVVETIKREKESKYHKAFVGIKEYKELDEEFGKAQ
KPWATAFGKVQRAKKNYHSACKSRDSAKLNLDQNKDVAPPEKIKKLEEAI
EKQEKSVSTMQGKYEEKLSRIEPINKSYEDEMKKVYSKFSKAEEERKDFL
QRIMVEFHKAVNVSEDPRLKECFENQINAAYAGKSSYDVTWYSENYGADM
ARNWPKFEELGDLPDLPAPVRAVEPPENQRFSSNSSIPRSGSSQFQQQTN
TLYEPASQQSVVPVQSQQVASYQPNNEPEESNPFMNGDDDDDVDGAEWDN
PPPLPAEGVPVRALYDYDKVEDDELSFKANDILTKLSEEDEQGWCRGRLD
GVEGLYPANYVELM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002755XLOC_002755Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004863TCONS_00004863Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR001060FCH_dom
IPR031160F_BAR
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..245
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableGENE3D2.30.30.40coord: 408..463
e-value: 4.0E-20
score: 70.8
NoneNo IPR availableGENE3D1.10.287.620coord: 115..258
e-value: 8.3E-5
score: 21.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..409
NoneNo IPR availableCDDcd11843SH3_PACSINcoord: 410..462
e-value: 2.13195E-29
score: 108.276
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 423..438
score: 36.16
coord: 409..419
score: 43.58
coord: 452..464
score: 41.22
IPR001452SH3 domainSMARTSM00326SH3_2coord: 409..464
e-value: 2.5E-16
score: 70.2
IPR001452SH3 domainPFAMPF14604SH3_9coord: 413..462
e-value: 1.9E-15
score: 56.3
IPR001452SH3 domainPROSITEPS50002SH3coord: 406..464
score: 15.709
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 401..463
IPR001060FCH domainSMARTSM00055fch_2coord: 24..121
e-value: 5.7E-4
score: 29.2
IPR001060FCH domainPFAMPF00611FCHcoord: 34..103
e-value: 2.7E-10
score: 40.3
IPR031160F-BAR domainPROSITEPS51741F_BARcoord: 19..288
score: 20.819
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 31..309

Blast
[Close]
BLAST of TCONS_00004863-protein vs. Swiss-Prot (Human)
Match: PACN1 (Protein kinase C and casein kinase substrate in neurons protein 1 OS=Homo sapiens GN=PACSIN1 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.006e-80
Identity = 160/445 (35.96%), Postives = 241/445 (54.16%), Query Frame = 0 
Query:   25 NFWEIGNYTRCCKRITDSNNLCDDLIKMYTERAEIEAKYSKKLTDWHERWSKHLEASPAVYATMKTAHLGTLKEAHDRAIIHMDCWTKIHNQVVETIKREKESKYHKAFVG-IKEYKELDEEFGKAQKPWATAFGKVQRAKKNYHSACKSRDSA---KLNLDQNKDVAPPEKIKKLEEAIEKQEKSVSTMQGKYEEKLSRIEPINKSYEDEMKKVYSKFSKAEEERKDFLQRIMVEFHKAVNVSEDPRLKECFENQINAAYAGKSSYDVTWYSENYGADMARNWPKFEELGDLPDLPAPVRAVEPPENQRFSSNSSIPRSGSSQFQQQTNTLYEPASQQSVVPVQSQQVASYQPNNEPEESNPFMNGDDDDDVDGAEWDNPPPLPAEGVPVRALYDYDKVEDDELSFKANDILTKLSEEDEQGWCRGRLD-GVEGLYPANYVELM 464
            +FWE+GNY R  KRI D + LC+DL+    ERA+IE  Y ++LTDW +RW + +E  P  Y +++ A    + EA   + +H +    + N+ +E +K  ++  YHK  +G  KE KE ++ F KAQKPWA    +++ AKK YH ACK    A   ++N    + V P E+ KKL++ ++K ++ V   Q KYE+ L  +      Y + M++V+ +  + EE+R  FL+ ++++  + +N++E+      +     A     +  D+ W+    G  M  NWP+FEE    PDLP      E  + ++    +    +G+ +   Q       +S     P  ++        ++ E  NPF   + +    GA   NP    ++GV VRALYDYD  E DELSFKA D LTKL EEDEQGWCRGRLD G  GLYPANYVE +
Sbjct:   18 SFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQ-YGSLERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTP-EQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWN--PDLPHTTTKKEK-QPKKAEGVALTNATGAVESTSQAGDRGSVSSYDRGQPYATEW-------SDDESGNPFGGSETNG---GA---NPFEDDSKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI 444
The following BLAST results are available for this feature:
BLAST of TCONS_00004863-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PACN11.006e-8035.96Protein kinase C and casein kinase substrate in ne... [more]
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