TCONS_00004933-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004933-protein
Unique NameTCONS_00004933-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length593

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004933-protein ID=TCONS_00004933-protein|Name=TCONS_00004933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=593bp
MNKPVWFLVFLCVAGVAQGLVVTGVAFTILTSIEKQFGFSSSHVALFGTV
YDTAYGIFCVFIGYVGHRHKPRFLGYGLIIMACGAVLTSVPKYIIGTYDV
GTERDTDFCRFSVTSTHTPICGGSAEWYYTLIFLAGNAMIGIGATPLYVL
GPSHLDEITHRGQNALYTGIFYACAALGPALGFIIGLPILNTWVDLEQPA
NSNLTPEDRNWVGAWWIGYLVGAVIMLLPAAPMLGFPKLFPNAEKVKQAK
SELEDTIEEDKNLNHNFKSVWPATKSLLKNIPFVCICLASATESLAIGGF
STFFSKFVETQFHVTSGSSSLYSGVIIIPGAAGGMFLGGFLINRYKWNCK
QILRAASMMAFVAAVCVASTLIGCKGREVVGGDLPYANSSTISLQSGCNE
YCQCSIRYYKPVCSVVDQQTYFSPCHAGCSNNHTVTIDGEKHFQNCSCVA
SLVKDGRCTPECNLFPLFFVCAFLMMFFTFMNNVPMLMATLRVVPEGQGS
FAMGFQQIFVRFLGFIPAPTMFGRLIDESCKLWHKEECTGETTSCLEYKN
KDFRNYLFAMGLVIKVIGLIFTLAAYKVYKLPDQTSPQVYMEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002791XLOC_002791Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004933TCONS_00004933Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002350Kazal_dom
IPR004156OA_transporter
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 243..266
NoneNo IPR availableGENE3D1.20.1250.20coord: 3..253
e-value: 8.1E-22
score: 77.0
NoneNo IPR availableGENE3D1.20.1250.20coord: 267..580
e-value: 4.2E-25
score: 87.8
NoneNo IPR availableCDDcd01330KAZAL_SLC21coord: 394..449
e-value: 4.68385E-17
score: 75.0333
IPR002350Kazal domainPFAMPF07648Kazal_2coord: 402..448
e-value: 1.4E-5
score: 25.0
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 392..447
score: 11.514
IPR004156Organic anion transporter polypeptide OATPTIGRFAMTIGR00805TIGR00805coord: 6..579
e-value: 5.4E-126
score: 419.1
IPR004156Organic anion transporter polypeptide OATPPFAMPF03137OATPcoord: 6..553
e-value: 2.1E-139
score: 465.2
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 7..580
score: 10.654
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 8..370
e-value: 1.25903E-10
score: 60.7905
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 133..374
coord: 4..95
coord: 463..577

Blast
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BLAST of TCONS_00004933-protein vs. Swiss-Prot (Human)
Match: SO4A1 (Solute carrier organic anion transporter family member 4A1 OS=Homo sapiens GN=SLCO4A1 PE=1 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 8.401e-107
Identity = 216/618 (34.95%), Postives = 334/618 (54.05%), Query Frame = 0 
Query:    1 MNKPVWFLVFLCVAGVAQGLVVTGVAFTILTSIEKQFGFSSSHVALFGTVYDTAYGIFCVFIGYVGHR-HKPRFLGYGLIIMACGAVLTSVPKYIIGTYDVGTERDTDFCRFSVTSTHTPICGGSAEWY--YTLIFLAGNAMIGIGATPLYVLGPSHLDEITHRGQNALYTGIFYACAALGPALGFIIGLPILNTWVDLEQPANSNLTPEDRNWVGAWWIGYLVGAVIMLLPAAPMLGFPKLFPNAEKVKQAKS----ELEDTIEEDKNLNHNFK--------SVWPATKSLLKNIPFVCICLASATESLAIGGFSTFFSKFVETQFHVTSGSSSLYSGVIIIPGAAGGMFLGGFLINRYKWNCKQILRAASMMAFVAAVCVASTL------IGCKGREVVGGDLPYANS----STISLQSGCNEYCQCSIRYYKPVCSVVDQQTYFSPCHAGCSNNHTVTIDGEKHFQNCSCVASLVKDG-------RCTPECNLFPLFFVCAFLMMFFTFMNNVPMLMATLRVVPEGQGSFAMGFQQIFVRFLGFIPAPTMFGRLIDESCKLWHKEECTGETTSCLEYKNKDFRNYLFAMGLVIKVIGLIFTLAAYKVYKLPDQTS 586
            +N P   L FLC A   QG+ V G   T++TS+E+++   S    L  + YD A  +   F+ Y G   HKPR+LG+G+++M  G+++ ++P +  G Y+V  +     C     +    +C  S      Y L+F+ G  + G+GATPLY LG ++LDE      + +Y  IFY  A LGPA G++IG  +LN + ++ +   + LT E   WVGAWW+G+L         A P+LG+P+  P +++    ++    +L+D+   + + N +F         S+W     LLKN  F+ +CLA ATE+  I G STF  KF+E+QF +++  ++   G +++P   GG FLGGF +N+ +      LR ++++ F     V S L      + C    + G    Y  S      ++L + CN  C C   +Y PVC   D   YFS CHAGC       +DG+K +++CSC+   +  G       +CT  C   PL  V  F+++FFTF++++P L ATLR V + Q SFA+G Q I VR LG IP P  FG +ID++C LW +++C G+  SCL Y+N     Y+  MGL+ KV+G++F   A  +YK   ++S
Sbjct:   99 LNTPKGILFFLCAAAFLQGMTVNGFINTVITSLERRYDLHSYQSGLIASSYDIAACLCLTFVSYFGGSGHKPRWLGWGVLLMGTGSLVFALPHFTAGRYEVELDAGVRTC----PANPGAVCADSTSGLSRYQLVFMLGQFLHGVGATPLYTLGVTYLDENVKSSCSPVYIAIFYTAAILGPAAGYLIGGALLNIYTEMGR--RTELTTESPLWVGAWWVGFLGSGAAAFFTAVPILGYPRQLPGSQRYAVMRAAEMHQLKDSSRGEAS-NPDFGKTIRDLPLSIW----LLLKNPTFILLCLAGATEATLITGMSTFSPKFLESQFSLSASEAATLFGYLVVPAGGGGTFLGGFFVNKLR------LRGSAVIKFCLFCTVVSLLGILVFSLHCPSVPMAGVTASYGGSLLPEGHLNLTAPCNAACSCQPEHYSPVCGS-DGLMYFSLCHAGCPAATETNVDGQKVYRDCSCIPQNLSSGFGHATAGKCTSTCQRKPLLLVFIFVVIFFTFLSSIPALTATLRCVRDPQRSFALGIQWIVVRILGGIPGPIAFGWVIDKACLLW-QDQC-GQQGSCLVYQNSAMSRYILIMGLLYKVLGVLFFAIACFLYKPLSESS 696
The following BLAST results are available for this feature:
BLAST of TCONS_00004933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SO4A18.401e-10734.95Solute carrier organic anion transporter family me... [more]
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