TCONS_00004956-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004956-protein
Unique NameTCONS_00004956-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004956-protein ID=TCONS_00004956-protein|Name=TCONS_00004956-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MTEPIAEENIPADEKPEKQPDDFNDDVNYKEKYRTLKRKLKSLLYEQECF
HEELRKIQRKCLRVSRDKSFLLDRLLQYEQPGLSSDEELTDSSDDEEEKP
QISKKQISKTSKQKSKAVSNASSGSKNSDKIRCKQMENGKQCSKLVSKKI
VSGICQTHRQQANKSKVTETKKETSSKADNPAPVKRVAGGGKDIGQFREA
MEASQKELSDSEANEEEDELIIDVPH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002804XLOC_002804Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004956TCONS_00004956Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Blast
[Close]
BLAST of TCONS_00004956-protein vs. Swiss-Prot (Human)
Match: IN80E (INO80 complex subunit E OS=Homo sapiens GN=INO80E PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.843e-23
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0 
Query:   24 NDDVNYKEKYRTLKRKLKSLLYEQECFHEELRKIQRKCLRVSRDKSFLLDRLLQYE 79
            + +V+YK+KYR LKRKLK L+YE ECF EELRK QRK L+VSRDKSFLLDRLLQYE
Sbjct:    6 DGEVDYKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLLKVSRDKSFLLDRLLQYE 61
The following BLAST results are available for this feature:
BLAST of TCONS_00004956-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IN80E2.843e-2376.79INO80 complex subunit E OS=Homo sapiens GN=INO80E ... [more]
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