unclassified Wnt protein X3 (polypeptide) - C. hemisphaerica

Overview
Nameunclassified Wnt protein X3
Unique NameTCONS_00005153-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length365

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005153-protein ID=TCONS_00005153-protein|Name=unclassified Wnt protein X3|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MLWTKMFVLMTFYVGASHQVLEWLDEHVHKVQDWEVKDCESNRVPFSKRQ
RNICKRNLGYMQFLAKSIPSIKHECRVAFTHEQWNCDVILNSPNFDRSID
AATKESAAVQALAAAKILHTTINDCGLKGMCKKCADREEVIPADRPRSAG
EEKLEVIIHQSGACEEMFPQPMNFIKRFLKVGRKKMAEYKQSWPEKYAQE
NINFHNKQAGLEVAYETRSPRCYCPGIFPVCYTKICYTAMDHFYKVGRKI
REMYYKARKVRITDDGNFVPVHEPNRPIEKKELIYAEEFNVCDTKEGLKD
RPCSIDEDMFKITRYPYCKDMCCGKNQYKSRPSKLIWECNCKFKWCCEVK
CQTCSEDQIRYTCTQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002938XLOC_002938Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005153TCONS_00005153Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntSMARTSM00097wnt1_3coord: 42..364
e-value: 1.9E-16
score: -8.7
IPR005817WntPFAMPF00110wntcoord: 46..363
e-value: 5.2E-50
score: 170.6

Blast
[Close]
BLAST of unclassified Wnt protein X3 vs. Swiss-Prot (Human)
Match: WNT5A (Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 5.870e-33
Identity = 87/332 (26.20%), Postives = 143/332 (43.07%), Query Frame = 0 
Query:   41 SNRVPFSKRQRNICKRNLGYMQFLAKSIPSIKHECRVAFTHEQWNCDVILNSPNFDRSIDAATKESAAVQALAAAKILHTTINDCGLKGMCKKCADREEVIPADRPRSAGEEKLEVIIHQSGACEEMFPQPMNFIKRFLKVGRKKMAEYKQSWPEKYAQENINFHNKQAGLEVAYETRSPRCYCPGIFPVCYTKICYTAMDHFYKVGRKIREMYYKARKVRITDDGNFVPVHEPNRPIEKKELIYAEEF------NVCDTKEGLKDRPCS-IDEDMFKITRYPYCKDMCCGK--NQYKSRPSKLIWECNCKFKWCCEVKCQTCSEDQIRYTC 363
            S     S+ Q+ +C     +MQ++ +   +   EC+  F H +WNC  + N+  F R +   ++E+A   A++AA +++     C  +G    C       P D PR              G C +       F K F+    ++    K S+    A+  +N HN +AG    Y      C C G+   C  K C+  +  F KVG  ++E Y  A  +R+   G  V V+        ++L+Y +        N      G + R C+   E M        C+ MCCG+  +Q+K+  ++    C+CKF WCC VKC+ C+E   ++ C
Sbjct:   70 SQLAGLSQGQKKLCHLYQDHMQYIGEGAKTGIKECQYQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRAC-REGELSTCGCSRAARPKDLPRD----------WLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYES--ARILMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRLNSRGKLVQVNSRFNSPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGM------DGCELMCCGRGYDQFKTVQTE---RCHCKFHWCCYVKCKKCTEIVDQFVC 379
The following BLAST results are available for this feature:
BLAST of unclassified Wnt protein X3 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT5A5.870e-3326.20Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2[more]
back to top