TCONS_00006036-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006036-protein
Unique NameTCONS_00006036-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length384

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006036-protein ID=TCONS_00006036-protein|Name=TCONS_00006036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MSNEYVRRLQGGFHDNTLRKWQGRGQNITPDCMMYPVFVSTEADLLEEIT
TLPGQYKVGKNKLLAYLKPMVENGLKSIILFPTDVEKRNDTDVFYHLHYT
DENPAVDAIMLIKKHFRHVTVACDVCLCGFVESGLCFTLTDEPVRRPNYD
KKDESLSKTEKMSLYVNSQAVDSKSTLQFISNLALVYAKHGADIVAPSDM
NDGRVGAIDKVLEDKCLRGKCAIMSYSAKFSSCMYGPFRGACDSTPITGN
RDGCQLPPASSGLANRAVDRDIVENADIVMVKPSMMYLDIVRDIKQKHPH
HPIAAYQVSGEYAMMHAAVEKGIFQMKKLVYENFTCMQRAGVDIIISYFT
PMVLKWLIEDRQEEQEQLNTIMKKLETKGVFDGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003444XLOC_003444Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006036TCONS_00006036Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001731ALAD
IPR013785Aldolase_TIM
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004655porphobilinogen synthase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033014 tetrapyrrole biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004655 porphobilinogen synthase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 358..378
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 170..358
coord: 5..143
IPR001731Delta-aminolevulinic acid dehydrataseSMARTSM01004ALAD_2coord: 4..357
e-value: 3.1E-88
score: 309.1
IPR001731Delta-aminolevulinic acid dehydratasePIRSFPIRSF001415Porphbilin_synthcoord: 162..360
e-value: 5.9E-69
score: 230.4
coord: 1..166
e-value: 3.3E-22
score: 76.8
IPR001731Delta-aminolevulinic acid dehydratasePFAMPF00490ALADcoord: 8..356
e-value: 1.5E-96
score: 323.2
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 3..360
e-value: 5.3E-110
score: 366.9

Blast
[Close]
BLAST of TCONS_00006036-protein vs. Swiss-Prot (Human)
Match: HEM2 (Delta-aminolevulinic acid dehydratase OS=Homo sapiens GN=ALAD PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.711e-95
Identity = 148/352 (42.05%), Postives = 209/352 (59.38%), Query Frame = 0 
Query:    9 LQGGFHDNTLRKWQGRGQNITPDCMMYPVFVSTEADLLEEITTLPGQYKVGKNKLLAYLKPMVENGLKSIILFPTDVEKRNDTDVFYHLHYTDENPAVDAIMLIKKHFRHVTVACDVCLCGFVESGLCFTLTDEPVRRPNYDKKDESLSKTEKMSLYVNSQAVDSKSTLQFISNLALVYAKHGADIVAPSDMNDGRVGAIDKVLEDKCLRGKCAIMSYSAKFSSCMYGPFRGACDSTPITGNRDGCQLPPASSGLANRAVDRDIVENADIVMVKPSMMYLDIVRDIKQKHPHHPIAAYQVSGEYAMMHAAVEKGIFQMKKLVYENFTCMQRAGVDIIISYFTPMVLKWLIED 360
            L  G+    LR WQ     +    ++YP+FV+   D ++ IT+LPG  + G  +L   L+P+VE GL+ +++F   V  R   D       ++E+PA++AI L++K F ++ VACDVCLC +   G C  L++                          + A  ++ + Q ++ +AL YAK G  +VAPSDM DGRV AI + L    L  + ++MSYSAKF+SC YGPFR A  S+P  G+R   QLPP + GLA RAVDRD+ E AD++MVKP M YLDIVR++K KHP  P+A Y VSGE+AM+    + G F +K  V E  T  +RAG DIII+Y+TP +L+WL E+
Sbjct:    7 LHSGYFHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIF--GVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSE--------------------------NGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLKEE 330
The following BLAST results are available for this feature:
BLAST of TCONS_00006036-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEM21.711e-9542.05Delta-aminolevulinic acid dehydratase OS=Homo sapi... [more]
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