TCONS_00006126-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006126-protein
Unique NameTCONS_00006126-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006126-protein ID=TCONS_00006126-protein|Name=TCONS_00006126-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MTNKPSNGQIAAIGIELVVFAVLSYFGVKWIAKVLDPTSKQKEAAQKQAE
KITKSLGIETELTEYETTIAALLIDPLNLPNTWHDIGGLDSVISEMRETV
ILPLQRRALFQTSNLLSAPKGVLLFGPPGCGKTMIARATAKEAGCHFINL
DVSSLTDKWYGESQKLANAVFSLALKIQPCIIFIDEIDSFLRSRESNDHE
VTAMMKAQFMSQWDGLLSQTSCDVIIMGATNRPHDIDRAILRRLPCRFHI
GLPELVQRKAILKIILAEEDLSEDVDFDNLASQTKGYAGSDLKEFCRYAA
LHCLRRQVIDIDCATMDGVSHNNMFLSLEQNDFNSAVERMKKNRILFEPS
HPLEQAANHDVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003498XLOC_003498Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006126TCONS_00006126Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 118..254
e-value: 7.3E-19
score: 78.7
NoneNo IPR availableGENE3D3.40.50.300coord: 70..264
e-value: 4.6E-48
score: 163.3
NoneNo IPR availableGENE3D1.10.8.60coord: 265..341
e-value: 2.3E-19
score: 68.9
NoneNo IPR availableCDDcd00009AAAcoord: 116..252
e-value: 3.82487E-23
score: 92.5943
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 122..251
e-value: 3.2E-36
score: 124.5
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 224..243
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 80..344

Blast
[Close]
BLAST of TCONS_00006126-protein vs. Swiss-Prot (Human)
Match: ATAD1 (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 1.603e-144
Identity = 195/340 (57.35%), Postives = 255/340 (75.00%), Query Frame = 0 
Query:    6 SNGQIAAIGIELVVFAVLSYFGVKWIAKVLDPTSKQKEAAQKQAEKITKSLGIE-TELTEYETTIAALLIDPLNLPNTWHDIGGLDSVISEMRETVILPLQRRALFQTSNLLSAPKGVLLFGPPGCGKTMIARATAKEAGCHFINLDVSSLTDKWYGESQKLANAVFSLALKIQPCIIFIDEIDSFLRSRESNDHEVTAMMKAQFMSQWDGLLSQTSCDVIIMGATNRPHDIDRAILRRLPCRFHIGLPELVQRKAILKIILAEEDLSEDVDFDNLASQTKGYAGSDLKEFCRYAALHCLRRQVIDIDCATMDGVSHNNMFLSLEQNDFNSAVERMKKNR 344
            S  ++  +   L +F  ++YF +KW+   +DPT KQK  AQKQAEK+ K +G++  +L+EYE +IAA L+DPLN+  TW DI GLD VI+++++TVILP++++ LF+ S LL  PKGVLL+GPPGCGKT+IA+ATAKEAGC FINL  S+LTDKWYGESQKLA AVFSLA+K+QP IIFIDEIDSFLR+R S+DHE TAMMKAQFMS WDGL +  SC VI+MGATNRP D+D AI+RR+P RFHI  P L QR+AILK+IL  E++   VD   +A +T G++GSDLKE CR AAL C+R  V     +T +     +    ++Q D + A+E+MKK++
Sbjct:   12 SRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYV----NSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
The following BLAST results are available for this feature:
BLAST of TCONS_00006126-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATAD11.603e-14457.35ATPase family AAA domain-containing protein 1 OS=H... [more]
back to top