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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00006210-protein ID=TCONS_00006210-protein|Name=TCONS_00006210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=358bp
MQIQIKTNMADEREDVIGKSIKKILGKIDICLKLQQSRAVRNIVAEKDTL
CVLPCGYGKSLIFQILPALLTELGHCSNPLVIIAVPLKSLIESHLKSALK
FALLGIKATCLSSGNYNDIASGKYNLIFGCAELWLKKQWRELLSTKLFRK
NLVCFVLDEAHNVTWGRADKKSKVPFRKAFGEISVIRSCCRPGTPMLALS
ATVNVDLTEMIKESCNLSRNFKFICDENNVSHLKQSVIKIKGKTIEPLRW
LIQLLIDQKSNCPKTIIFCRTIELAGWMYERMENILKLHVPNWQNLIGMY
HSETLPHKKKRVLDSLIDPHGAVRITVATSALGCGVDAKDLTNVISDQHT
VLLTTVSR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | SMART | SM00487 | ultradead3 | coord: 28..237
e-value: 2.2E-12
score: 57.1 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 40..221
score: 14.47 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 238..349
e-value: 3.9E-12
score: 45.5 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 5..237
e-value: 5.0E-20
score: 71.2 |
| None | No IPR available | CDD | cd00046 | DEXDc | coord: 47..202
e-value: 6.5897E-16
score: 72.37 |
| None | No IPR available | CDD | cd00079 | HELICc | coord: 233..345
e-value: 2.67408E-7
score: 46.8473 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 249..345
e-value: 1.8E-6
score: 28.2 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 250..358
score: 8.457 |
| IPR011545 | DEAD/DEAH box helicase domain | PFAM | PF00270 | DEAD | coord: 36..207
e-value: 2.3E-10
score: 40.4 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 43..347 |
Blast
The following BLAST results are available for this feature:
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