TCONS_00006219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006219-protein
Unique NameTCONS_00006219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length723

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006219-protein ID=TCONS_00006219-protein|Name=TCONS_00006219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=723bp
MAEGGNVTEEDVGQVNARNIFGDPSDSYLMKDVSDIELHLGELDITSQDE
HVLDELDEFIQRNLEDNLVKEALNKGVDLRQYSKQIETDLREVEDDSIQD
YIKESKNIANLHQQIKACDGILETMENMLSGFQIDLKSISAEIQTLQEQS
LRMNIKLKNRQAIKSELSQFIDELIVPESMIYAINDLQPTEQTFIEQLHE
LSHKINIVKEQGFKGAMACNDVRDVLEKLKLKAVSKIREFVLQRVYQCRK
PMSNYQVPQNALLKYRYFFEFLLMHHQQVAREIRDEYVDTMSKIYSAYFG
GYIAKLMKLQYEELAGKDDLMGVEDTAKARGFFSSKTPLKNRSTIFSLGS
RGQVLTDLLEEPIIVPHAAQKTEKRYSYEALFRSQHFALLDNACREYLFL
CDFFLVSGNQATKLFVSVMGKVITVFNKHMTSYIATCYDAIAIFLCIHII
HRYKIIMLKREVPILEKYWDTLLDSLWPRFMKMVELNAQSVKQTDPQKLG
NIDIQPHYITRRYAEFSGAINSLNESFPDERVLKCLGKLQREVESFILRR
ASEFVKRKDHLVFLINNYDMMIQVIQERTTDDSKESDSFQQTLNTKIQEY
IEEVLSPYFGGMMTFVKETEPMIERGQAQSIRVNEGQVTQLVRDFAVRWK
AAIEGMNSELMRSFSNFKNGTQILQGALAQLIQYYHRFQKILSQPPFSRL
ACRTELINIHHVMVEVKKHKTAF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003565XLOC_003565Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006219TCONS_00006219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007258Vps52
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..149
IPR007258Vps52PFAMPF04129Vps52coord: 93..600
e-value: 5.2E-189
score: 629.1

Blast
[Close]
BLAST of TCONS_00006219-protein vs. Swiss-Prot (Human)
Match: VPS52 (Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens GN=VPS52 PE=1 SV=1)

HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 414/687 (60.26%), Postives = 546/687 (79.48%), Query Frame = 0 
Query:   38 LHLGELDITSQDEHVLDELDEFIQRNLEDNLVKEALNKGVDLRQYSKQIETDLREVEDDSIQDYIKESKNIANLHQQIKACDGILETMENMLSGFQIDLKSISAEIQTLQEQSLRMNIKLKNRQAIKSELSQFIDELIVPESMIYAINDLQPTEQTFIEQLHELSHKINIVKEQGFKGAMACNDVRDVLEKLKLKAVSKIREFVLQRVYQCRKPMSNYQVPQNALLKYRYFFEFLLMHHQQVAREIRDEYVDTMSKIYSAYFGGYIAKLMKLQYEELAGKDDLMGVEDTAKARGFFSSKTPLKNRSTIFSLGSRGQVLTDL-LEEPIIVPHAAQKTEKRYSYEALFRSQHFALLDNACREYLFLCDFFLVSGNQATKLFVSVMGKVITVFNKHMTSYIATCYDAIAIFLCIHIIHRYKIIMLKREVPILEKYWDTLLDSLWPRFMKMVELNAQSVKQTDPQKLGNIDIQPHYITRRYAEFSGAINSLNESFPDERVLKCLGKLQREVESFILRRASEFVKRKDHLVFLINNYDMMIQVIQERTTDDSKESDSFQQTLNTKIQEYIEEVLSPYFGGMMTFVKETEPMIERGQAQSIRVNEGQVTQLVRDFAVRWKAAIEGMNSELMRSFSNFKNGTQILQGALAQLIQYYHRFQKILSQPPFSRLACRTELINIHHVMVEVKKHKTAF 723
            L LGELDITS DE +LDE+D  IQ NLED LVKEAL  GVDLR YSKQ+E +L+++E  SI+DYI+ES+NIA+LH QI ACD +LE ME ML  FQ DL SIS+EI+TLQEQS  MNI+L+NRQA++ +L + +D L+VP +++ AI +   TE  F+EQL EL  K   V+EQ  +G  AC DVR VL++L++KAV+KIREF+LQ++Y  RKPM+NYQ+PQ ALLKYR+F++FLL + +  A+EIRDEYV+T+SKIY +Y+  Y+ +LMK+QYEE+A KDDLMGVEDTAK +GFFS K  L++R+TIF+LG+RG V++   LE PI+VPH AQ+ E+RY +EALFRSQH+ALLDN+CREYLF+C+FF+VSG  A  LF +VMG+ +++  KH+ SY+A CYDAIA+FLCIHI+ R++ I  KR+VP L++YW+ +L  LWPRF  ++E+N QSV+ TDPQ+LG +D +PHYITRRYAEFS A+ S+N++ P+ER ++ LG+LQ EVE+F+LR A+EF  RK+ LVFLINNYDMM+ V+ ER  DDSKE +SFQQ LN + QE+IEE+LSP FGG++ FVKE E +IERGQA+ +R  E +VTQL+R F   WK+++E ++ ++MRSF+NF+NGT I+QGAL QLIQ YHRF ++LSQP    L  R ELINIHH+MVE+KKHK  F
Sbjct:   40 LQLGELDITS-DEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAK-KGFFS-KPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLKHLDSYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF 723
The following BLAST results are available for this feature:
BLAST of TCONS_00006219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS520.000e+060.26Vacuolar protein sorting-associated protein 52 hom... [more]
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