TCONS_00046155-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046155-protein
Unique NameTCONS_00046155-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046155-protein ID=TCONS_00046155-protein|Name=TCONS_00046155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
MALRILGSTLRQGKTIAKVARLSTSAAARKAVLSETIPTDLEQATGVERK
ELEAILGGNPDPFNMNITKGAPGTRDAPTLVPSMYEERIIGCVCEEEATT
IVWMVLKKGGAQRCKCGNFFQLVPGKANALAD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029483XLOC_029483Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046155TCONS_00046155Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002124Cyt_c_oxidase_su5b
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005740 mitochondrial envelope
molecular_function GO:0004129 cytochrome-c oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002124Cytochrome c oxidase, subunit VbGENE3D2.60.11.10coord: 34..124
e-value: 1.3E-33
score: 114.4
IPR002124Cytochrome c oxidase, subunit VbPFAMPF01215COX5Bcoord: 28..124
e-value: 2.1E-20
score: 72.6
IPR002124Cytochrome c oxidase, subunit VbPRODOMPD007270coord: 42..123
e-value: 3.0E-24
score: 272.0
IPR002124Cytochrome c oxidase, subunit VbPROSITEPS51359COX5B_2coord: 32..129
score: 19.297
IPR002124Cytochrome c oxidase, subunit VbCDDcd00924Cyt_c_Oxidase_Vbcoord: 36..124
e-value: 5.56715E-37
score: 122.407
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 34..124

Blast
[Close]
BLAST of TCONS_00046155-protein vs. Swiss-Prot (Human)
Match: COX5B (Cytochrome c oxidase subunit 5B, mitochondrial OS=Homo sapiens GN=COX5B PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.761e-29
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0 
Query:   23 STSAAARKAVLSETIPTDLEQATGVERKELEAILGGNPDPFNMNITKGAPGTRDAPTLVPSMYEERIIGCVCEEEATTIVWMVLKKGGAQRC-KCGNFFQLVP 124
            S +AA R       +PTD EQATG+ER+ + A   G  DP+N+   KGA GTR+ P LVPS+  +RI+GC+CEE+ T++VW  L KG AQRC +CG  ++LVP
Sbjct:   23 SGAAAMRSMASGGGVPTDEEQATGLEREIMLAAKKGL-DPYNVLAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWFWLHKGEAQRCPRCGAHYKLVP 124
The following BLAST results are available for this feature:
BLAST of TCONS_00046155-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COX5B1.761e-2950.49Cytochrome c oxidase subunit 5B, mitochondrial OS=... [more]
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