TCONS_00046160-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046160-protein
Unique NameTCONS_00046160-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1537

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046160-protein ID=TCONS_00046160-protein|Name=TCONS_00046160-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1537bp
XDDLINAYYDKQIIIMAKAKSFCGTYKKLVFKWHLYQITDWDFQHRASSW
DRNPMTLDIDNTGISYNIPSRSLTAGYYIVKFQAILQNANVEESVEKYIK
VNEEKMQAVISGGSFRTLPWQNDIYLDADQSYDPNEAEPTLKLEYNWYCE
YSFHGVRTGCFSQDPDEVKQVGSRWRIAKRTLLERQEYQIKLVVVKNRGN
RIALAYQTIVLVDREIPVVSISCFTNCEALVDPSKRFTLTSTCQNCRSHQ
NISYRWTVDTTADMNLTEASLTDLSSTNLVVKENQMNEDQTYTFLLIVTK
SLGIESTTRYHINTNRPPYGGQCSVTPDNGTAIETVFNINCANWQSGIGI
SNYHLFIQRIDSHPLLASHPSGKMNVQLPAGDRTDNVLNLSVEIVDSFGA
STIVDFSLQVNPVAYTTELYNELTEATTDKGGRLWNLADEGDIQSLIPYV
HTITSFLNVNETVDDPNEGLIQNRQKIRKSIAEVLSEMKIQHFEGVKQTA
DTLSPLLQKSSEITPQTQEFVLKTLTNVADFLENDKSELKKETPEKIQDM
TSGVVKAAGKLIHIASDDRKDESIKDEEIKQGVLNILKDVSPKLLIGKVP
GEQPSRISSDNIALEVSKTEIGNLEREIETVDGRRLKIPANPFGDLASTN
TSLIINSKMYTLTTNPFTNGATAKHVNAPVINLEFTTNDDEIISVKDLSI
GNEIEFFVSQTTPPITVLVNSTEFGRENFIRRRYEFIQNGPMIFQIKLPK
NTTVKFIFWHGKDNGDVDSILNTKEITGNGGYSPPITIQFSSFKFSFVTM
VMEYGMTEEDILNGFDVPYFDIEVQTTTTGCVYYDQKISDWSDGGCRIGP
LSNMKETHCLCNHLTWLSSFYVPPRKLNIQAQLLKLKNLEEYPAILATFC
VIMGVSLVAMIWARRKDLNDTGCNEPTMLRSQSSRKGTTYHLAIYTGHRG
GSGTTATPVLILSGEKEDSQPLILKNEQRKLFDRGSVETFVFTSEQDLGD
LKYLTIWHDDVGANPSWFLSRITITNLNTSKQQQCFCNDWLAVDQSDGLI
SRVLPIASDSELKSFENIFLAKATQDLTDGHIWFSIIMRPARSNFSRVQR
VACCLSLLLSTMLSNAMFFRVDETRTAGDEINVSGVAVRWSTIVIGIQSA
LIVLPINIFIVLLFRRAAPDTSVKDQPALRRISSGNELATHRNSVKQKSV
IPRIILTDPSISSCSSAEEPPAIQNRQTVIFDLNRSSLFDNSAWHIRKKP
EVLTDGSQDFYGDDFLPMERSISNQTVYHYHANSDEMIGEPKRVHWGSLE
KFTYGEPFGINTPLLPPNFSTSKCRRLSTRDLISLPLYFSKSEPNLNHSY
GRESQTDQLRQNSTPDIHEYTDSHIMNFNAHGIFLNQFTAESVYQRPGTN
NRSGANNINPVALGTSEHQNFAESTYDGLNMAAIRARIPNQAGPHMAESI
YQRPGTNNRSGANNINPAALGTSEHQNFTESTYDGLNMAVNLSAAESVYS
RPGPNKQSGVNNINPAALGTSEHQNFTESTYDGLNMA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029486XLOC_029486Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046160TCONS_00046160Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000434PC1
IPR000203GPS
IPR001024PLAT/LH2_dom
IPR013783Ig-like_fold
IPR002859PKD/REJ-like
IPR014010REJ_dom
Vocabulary: Biological Process
TermDefinition
GO:0001822kidney development
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001822 kidney development
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 522..542
NoneNo IPR availableGENE3D3.40.1850.10coord: 116..221
e-value: 0.0069
score: 16.1
IPR000434Polycystic kidney disease type 1 proteinPRINTSPR00500POLYCYSTIN1coord: 1100..1122
score: 28.99
coord: 1142..1166
score: 34.0
IPR000203GPS motifSMARTSM00303GPS_3coord: 827..908
e-value: 1.8E-10
score: 50.8
IPR000203GPS motifPFAMPF01825GPScoord: 831..865
e-value: 1.2E-6
score: 28.9
IPR000203GPS motifPROSITEPS50221GPScoord: 828..876
score: 10.588
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 938..1052
e-value: 3.3E-4
score: 18.0
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 937..1065
e-value: 6.0E-34
score: 116.3
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 940..1047
e-value: 1.1E-15
score: 58.1
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 938..1055
score: 33.569
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 937..1049
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 222..320
e-value: 0.0046
score: 16.8
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 19..449
e-value: 8.1E-74
score: 248.9
IPR014010REJ domainPROSITEPS51111REJcoord: 1..665
score: 19.804

Blast
[Close]
BLAST of TCONS_00046160-protein vs. Swiss-Prot (Human)
Match: PK1L2 (Polycystic kidney disease protein 1-like 2 OS=Homo sapiens GN=PKD1L2 PE=1 SV=4)

HSP 1 Score: 261.922 bits (668), Expect = 2.321e-70
Identity = 128/362 (35.36%), Postives = 216/362 (59.67%), Query Frame = 0 
Query:  818 PYFDIEVQTTT--TGCVYYDQKISDWSDGGCRIGPLSNMKETHCLCNHLTWL-SSFYVPPRKLNIQAQLLKLKNLEEYPAILATFCVIMGVSLVAMIWARRKDLNDTGCNEPTMLRSQSSRKGTTYHLAIYTGHRGGSGTTATPVLILSGEKEDSQPLILKNEQRKLFDRGSVETFVFTSEQDLGDLKYLTIWHDDVGANPSWFLSRITITNLNTSKQQQCFCNDWLAVDQSDGLISRVLPIASDSELKSFENIFLAKATQDLTDGHIWFSIIMRPARSNFSRVQRVACCLSLLLSTMLSNAMFFRVDETRTAGDEINVSGVAVRWSTIVIGIQSALIVLPINIFIVLLFRRAAPDTSVKDQ 1176
            P  D+ V  TT  + CV++D+    W D GC++GP ++  +THCLCNHLT+  S+F V    +NI          E+ P ++ T   +  V ++ +IWARRKD  D    + T+L          Y + +YTGHR G+ T++   + L G   + +P  L +    +F+RG+V+ F+ ++   LG+L+ L +WHD+ G  PSW++SR+ + +L   ++    CN WL+++  D ++ +V P+A++ + K F ++F  K +    DGHIW+SI  R ARS+F+RVQRV+CC SLLL TML++ MF+ V +   A  ++++  +   W  ++IG++S++++ PIN+ IV +F+   P  + K+Q
Sbjct: 1267 PGRDLTVGITTFLSHCVFWDEVQETWDDSGCQVGPRTSPYQTHCLCNHLTFFGSTFLVMSNAINIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQAKVKVTVLEDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGEREPHHLADPDTPVFERGAVDAFLLSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLVMDRKWYFLCNSWLSINVGDCVLDKVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVSCCFSLLLCTMLTSIMFWGVPKD-PAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQIFQNTRPRVA-KEQ 1626
The following BLAST results are available for this feature:
BLAST of TCONS_00046160-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PK1L22.321e-7035.36Polycystic kidney disease protein 1-like 2 OS=Homo... [more]
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