TCONS_00046401-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046401-protein
Unique NameTCONS_00046401-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046401-protein ID=TCONS_00046401-protein|Name=TCONS_00046401-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MENLLQQTNRLVFQLQNDMSSLGRTPAGEALSNLEMSIQQNVQEVYKNCS
RLEEYVFKEPPQRKQASKLKVDQIIYDIRHIDSSYKGYIHKKRQQEAEER
RREELMSMPFRTNAENDTKISIDYALQHHDALQGADRNIGQMLHTGMSAL
EQMKNQRMSLKGVRRRMMDIGNTLGLSNTVMRMIDKRGTQDKWIVYGGII
LTLLIMFLTIKYLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029607XLOC_029607Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046401TCONS_00046401Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027027GOSR2/Membrin/Bos1
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0005484 SNAP receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027027GOSR2/Membrin/Bos1PIRSFPIRSF028865Membrin-2coord: 1..214
e-value: 1.1E-61
score: 206.3
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 124..187
e-value: 2.2E-14
score: 53.4
NoneNo IPR availableCDDcd15863SNARE_GS27coord: 122..187
e-value: 2.43129E-26
score: 96.4433
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 127..183

Blast
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BLAST of TCONS_00046401-protein vs. Swiss-Prot (Human)
Match: GOSR2 (Golgi SNAP receptor complex member 2 OS=Homo sapiens GN=GOSR2 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.459e-48
Identity = 83/214 (38.79%), Postives = 147/214 (68.69%), Query Frame = 0 
Query:    1 MENLLQQTNRLVFQLQNDMSSLGRTPAGEALSNLEMSIQQNVQEVYKNCSRLEEYVFKEPPQRKQASKLKVDQIIYDIRHIDSSYKGYIHKKRQQEAEERRREELMSMPFRTNAENDTKISIDYALQHHDALQGADRNIGQMLHTGMSALEQMKNQRMSLKGVRRRMMDIGNTLGLSNTVMRMIDKRGTQDKWIVYGGIILTLLIMFLTIKYLT 214
            M+ L QQT++ V ++Q+ M  L  T   +++  +E  IQ ++ +++    RLE    KEPP ++Q ++L+VDQ+ YD++H+ ++ + + H++  +E +ER+REEL+S  F TN ++DT I +D +LQ + +LQ     +  ++  G + L+ ++ QR++LKG +++++DI N LGLSNTVMR+I+KR  QDK+ + GG++LT ++MFL ++YLT
Sbjct:    1 MDPLFQQTHKQVHEIQSCMGRL-ETADKQSVHIVENEIQASIDQIFSRLERLEILSSKEPPNKRQNARLRVDQLKYDVQHLQTALRNFQHRRHAREQQERQREELLSRTFTTN-DSDTTIPMDESLQFNSSLQKVHNGMDDLILDGHNILDGLRTQRLTLKGTQKKILDIANMLGLSNTVMRLIEKRAFQDKYFMIGGMLLTCVVMFLVVQYLT 212
The following BLAST results are available for this feature:
BLAST of TCONS_00046401-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GOSR22.459e-4838.79Golgi SNAP receptor complex member 2 OS=Homo sapie... [more]
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