TCONS_00046535-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046535-protein
Unique NameTCONS_00046535-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length353

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046535-protein ID=TCONS_00046535-protein|Name=TCONS_00046535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
MTSSTVRCRSVLLLQKELFKINQSKVWGIEVEPMKCEDDDGEEDVFRWNV
LLSGLKKTPWKGGRFKIVMEFDKDFDAIPPRISFARPIPQHPNVSTTDGQ
VCLGCLEEWKPNTSLASVLISIQQLLSEPWFEKAWNEDAVHIAMETPKQY
KQMVLDNVMNSKRGVVVKDPTPAAAEKETSPKHKTITFKEISSPTLPANK
KSSERLSYESYLYDWRSLGTTHDEIDANTVTKELNKKLDMSEGSLQESMS
ETIFQQLSDHRKITYGSFNSTTEDEKAVKRAQLLKDNKIKLLKDLHSNKK
GIKSLRVSLPTSPANSPVEDLFDESNQVTESPNEIEAQQLLEWSQKLPEK
HTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029700XLOC_029700Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046535TCONS_00046535Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 12..163
e-value: 2.6E-24
score: 96.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..332
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 14..154
e-value: 8.4E-30
score: 103.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 12..152
score: 24.113
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 13..154
e-value: 3.42673E-31
score: 114.607
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 2..339
e-value: 2.0E-34
score: 118.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..168

Blast
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BLAST of TCONS_00046535-protein vs. Swiss-Prot (Human)
Match: UBC9 (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.849e-18
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:   37 EDDDGEEDVFRWNVLLSGLKKTPWKGGRFKIVMEFDKDFDAIPPRISFARPIPQHPNVSTTDGQVCLGCLEE---WKPNTSLASVLISIQQLLSEPWFEKAWNEDAVHIAMETPKQYKQMV 154
            ++ DG  ++  W   + G K TPW+GG FK+ M F  D+ + PP+  F  P+  HPNV  + G VCL  LEE   W+P  ++  +L+ IQ+LL+EP  +     +A  I  +   +Y++ V
Sbjct:   30 KNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPS-GTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRV 148
The following BLAST results are available for this feature:
BLAST of TCONS_00046535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBC91.849e-1835.54SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
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