TCONS_00046598-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046598-protein
Unique NameTCONS_00046598-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046598-protein ID=TCONS_00046598-protein|Name=TCONS_00046598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MAARRLSLNSVMRNHDKINVLRKKSKVDQEFVINVAFMGSAASGKTTIVH
RLMGKKFHQHYNPTVFDFYDYESKVDNTCRLSLQISDTAGAFSFPAMDRL
TIQKSDVVVVVFDLTSMGSLNHAEKLIKDIKRQCPRKAILIIGNKSDKPH
RVASKRLLNERVTCNFEHTYIETSAKLNDDITIDLLQRIKEEFALLEGPY
DVKRSEKPFSSKLKKHLSRSTLSLRDFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029742XLOC_029742Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046598TCONS_00046598Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 56..72
score: 24.74
coord: 170..192
score: 25.79
coord: 135..148
score: 35.16
coord: 74..96
score: 31.08
coord: 33..54
score: 22.78
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 35..192
e-value: 7.0E-12
score: 50.3
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 33..192
e-value: 7.9E-8
score: -12.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 35..188
e-value: 2.5E-5
score: -49.3
NoneNo IPR availableGENE3D3.30.70.1390coord: 32..98
e-value: 1.9E-13
score: 49.7
NoneNo IPR availableGENE3D3.40.50.300coord: 99..190
e-value: 1.5E-14
score: 53.2
NoneNo IPR availablePROSITEPS51419RABcoord: 28..228
score: 13.349
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 35..182
e-value: 3.7E-29
score: 101.3
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 33..181
e-value: 4.4E-19
score: 66.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..182

Blast
[Close]
BLAST of TCONS_00046598-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.628e-20
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0 
Query:   35 VAFMGSAASGKTTIVHRLMGKKFHQHYNPTVFDFYDYESKVDNTCRLSLQISDTAGAFSFPAMDRLTIQKSDVVVVVFDLTSMGSLNHAEKL---IKDIKRQCPRKAILIIGNKSDKPHRVASKRLLNERVTCNFEHTYIETSAKLNDDITIDLLQRI 189
            VA  G+   GK+++V R +   F + Y PTV D Y      D +   +LQI+DT G+  FPAM RL+I K    ++V+ +TS  SL   + +   I +IK       I+++GNK D+      +    E +   ++  ++ETSAKLN ++  +L Q +
Sbjct:   10 VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSI-CTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVK-ELFQEL 165
The following BLAST results are available for this feature:
BLAST of TCONS_00046598-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA25.628e-2032.91GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
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