TCONS_00046642-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046642-protein
Unique NameTCONS_00046642-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1189

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046642-protein ID=TCONS_00046642-protein|Name=TCONS_00046642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1189bp
MNRFDAHPSIIFRANDPEFKMHQTVIDLYEEHPPPVNRQMSSTPPPMGTP
INEVITPSLMRRGSQQVVMRHTDESPLVRLRRQDKRRAVQSSPLYNLLND
EEKFTEVTDSPDYKESGLKKLKSKSWESIARWEKENEFLFALIEDESEWL
MHLFPEETVSAASFFTDIEDGVLLCKLARLCHNYAEEDAKTTKKRVPMFL
FNIHSRTKCRGGFGKFMRRENVESFLRWCRVHKIPEPLLFESNDVVERTE
TEGMRENAREIVLCLMEVARLGVKYGVDPPKLIQLEREIELEEQLDGSSI
DGSISPISIDSGVDTMDSSFHYHINDVRQFDNLSEEDCDMTDSPHTNSRH
NMNNFVGNQQRNMNSSPRDENTSNSSNHNMDNSMDNSMDNSEGNRHNMND
NMDNTLCNGTTDSILIGGSSTQDLDSNSNSNNRTLLNGSGNQHSNHSDSS
GNSNDIDSQMLKTSPDGSLRDQNGMLIDPNGPKASGLNDQLGENQNGGFN
SDGTFNGANQNGGFRSDGAFNGGNQNGGLGSDGALNNGSQNGDFSSDGIF
DGRNQNGSFKGDGLNDKVRIGQNGTMFVDVSNSNHCGCQGDGNVNENGRY
RCYCGKNVDSGESSPQRRRGSLQDETLGKGGSDRKTSLEMRRRRLNMKKL
AAAGNKQNTPDGNRRKSADFPKTELHKKVTSITETYNVFKITRVKEGKYI
ILGKPMFVRLLNKHCIVRIGGGWDTLEHYLITHVSKIAPDEFEGSVISDY
QSPFIQQTTSPETQKKRKDRASNLKRSFLTKSSPNLLSFDDNSSVEGNGT
PDKNNRSPSPTLEYSKDPYFLEKQLKKNDDNKISQAILRVQNSINIKRAA
SLDWSSLYKPEPVSNNQQKLKSSVSKPNLLTMADVIFEPIVDTNISGNAE
DEQIVEINGASDVGQEVSMEEPVLTNGHTEPEILDTPEESSTPVEENSTP
VVQDTTDKTDTTPQDTEQVIVEEVVVVKKESSKSKTKDEPTKGVKGTKKT
ASTGGAKKSTSVTKTTSKVSNNVSKTTVTRTSISKVPTDKSTTKTTRPTA
TKTSTTRPKTAPTSSTRPTSSTRPTSKSPVKPVSTAPLKKKPTSAGTTRP
STATSRPTTVASKTSSSTTKTAKPTVSKTTTPKPTPKAPGVPRLGKPGQN
IAKKPATKPATGVSRTTTSATSKTAXRLDLLIEENLDKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029774XLOC_029774Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046642TCONS_00046642Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR003108GAS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008017microtubule binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 142..271
e-value: 0.0054
score: 26.0
IPR001715Calponin homology domainPFAMPF00307CHcoord: 157..266
e-value: 1.9E-7
score: 31.1
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 130..403
e-value: 1.9E-18
score: 66.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 140..250
score: 9.793
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 137..298
IPR003108Gas2-related domainSMARTSM00243GAS2coord: 673..736
e-value: 6.7E-7
score: 35.4
IPR003108Gas2-related domainPFAMPF02187GAS2coord: 677..733
e-value: 4.2E-14
score: 52.3
IPR003108Gas2-related domainGENE3D3.30.920.20coord: 666..741
e-value: 1.1E-14
score: 53.7
IPR003108Gas2-related domainPROSITEPS51460GARcoord: 663..737
score: 16.215
IPR003108Gas2-related domainSUPERFAMILY143575GAS2 domain-likecoord: 684..735

Blast
[Close]
BLAST of TCONS_00046642-protein vs. Swiss-Prot (Human)
Match: GAS2 (Growth arrest-specific protein 2 OS=Homo sapiens GN=GAS2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.159e-22
Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = 0 
Query:  139 LFALIEDESEWLMHLFPEETVSAASFFTDIEDGVLLCKLARLCHNYAEE--DAKTTKKRVPMFLFNIHSRTKCRGGF--GKFMRRENVESFLRWCRVHKIPEPLLFESNDVVERTETEGMRENAREIVLCLMEVARLGVKYGVDPPKLIQLEREIELEEQL 295
            L  + ED + WL +L  +E ++A +F   +++G LLC+LA       +E  DA    K +P+       +  C+     G F  R+N  +FL WCR   + E  LFES  +V       + +  RE+ LCL+E+ R+  +YGV+PP LI+LE+EIE EE L
Sbjct:   33 LLPMKEDLALWLTNLLGKE-ITAETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKNLPL------KKIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGLV-------LHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETL 179
The following BLAST results are available for this feature:
BLAST of TCONS_00046642-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAS25.159e-2236.02Growth arrest-specific protein 2 OS=Homo sapiens G... [more]
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