TCONS_00046755-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046755-protein
Unique NameTCONS_00046755-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046755-protein ID=TCONS_00046755-protein|Name=TCONS_00046755-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
LVSMILISMITKDGIVFSKVVQSFESEPYCTDHFYRGIEPKFIPKPNYRR
ICQTKESINTRKIFYATLYDTKLKIPVYSAYTLEIGASQKRPKWMVEPQL
ENKTLGDDMVTSRSVNRLYEFKTQASDQDYKGYGKIYFLTRGHLNPNAYH
DGRERIATFSLTNIVPQYDKFNSGSWNKAESTVKEIMAKYCFGNHDQRTL
PYVKKYVNAEAYFITGAVPSDRPSDVIGRNVTIPKMSFTAVCCTDPVRQK
KFSFGFYGYNVRDTRLQGTQAVDLFELQDLLNKEWPGNKKTGAQDVWLFE
DGCGAENGLIYVNAMNRKLNGNRKSRGRY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029840XLOC_029840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046755TCONS_00046755Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001604DNA/RNA_non-sp_Endonuclease
IPR020821Extracellular_endonuc_su_A
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001604DNA/RNA non-specific endonucleaseSMARTSM00892Endonuclease_NS_2coord: 61..281
e-value: 3.8E-27
score: 106.2
IPR001604DNA/RNA non-specific endonucleasePFAMPF01223Endonuclease_NScoord: 61..246
e-value: 6.0E-21
score: 75.2
IPR020821Extracellular Endonuclease, subunit ASMARTSM00477endopluscoord: 62..281
e-value: 2.5E-7
score: 2.5
NoneNo IPR availableGENE3D3.40.570.10coord: 45..284
e-value: 1.1E-35
score: 122.7
NoneNo IPR availableSUPERFAMILY54060His-Me finger endonucleasescoord: 30..265

Blast
[Close]
BLAST of TCONS_00046755-protein vs. Swiss-Prot (Human)
Match: ENDD1 (Endonuclease domain-containing 1 protein OS=Homo sapiens GN=ENDOD1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.069e-16
Identity = 82/287 (28.57%), Postives = 122/287 (42.51%), Query Frame = 0 
Query:   30 CTDHFYRGIEPKFIPKPNYRRICQTKESINTRKIFYATLYDTKLKIPVYSAYTL---EIGASQKRPKWMVEPQLE--NKTLGDDMVTSR---SVNRL---YEFKTQASDQDYKGYGKIYFLTRGHLNPNAYHDGRERIATFSLTNIVPQYDKFNSGSWNKAESTVKEIMAKYCFGNHDQRTLPYVKKYVNAEAYFITGAVPSD-RPSDVIGRNVTIPKMSFTAVCCTDPVRQKKFSFGFYGYNVRDTRLQGTQAVDLFELQDLLNKEWPGNKKTGAQDVWLFEDGCG 304
            C   FY G  P  +   ++ +ICQ  E        +ATLY T+ +IPVYSA+       G +++R  W+VEPQ++  N  L + +  +    SVN L       T   D DY+         RG L P +     + +ATF+LTN  P    F    +    S +   +   C    D               Y +TG VPSD R  D     V +P+  + A CC  P     ++ GF  +  RD+ +   + V + +LQ LL    P N +       LF++ CG
Sbjct:   34 CDKFFYAGTPPAGLAADSHVKICQRAEGAER----FATLYSTRDRIPVYSAFRAPRPAPGGAEQR--WLVEPQIDDPNSNLEEAINEAEAITSVNSLGSKQALNTDYLDSDYQ---------RGQLYPFSLSSDVQ-VATFTLTNSAPMTQSFQERWYVNLHSLMDRALTPQCGSGED--------------LYILTGTVPSDYRVKD----KVAVPEFVWLAACCAVP--GGGWAMGFVKHT-RDSDI--IEDVMVKDLQKLL----PFNPQ-------LFQNNCG 270
The following BLAST results are available for this feature:
BLAST of TCONS_00046755-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ENDD11.069e-1628.57Endonuclease domain-containing 1 protein OS=Homo s... [more]
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