TCONS_00046791-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00046791-protein
Unique Name	TCONS_00046791-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1019

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00046791-protein ID=TCONS_00046791-protein|Name=TCONS_00046791-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1019bp
MPGGKANFERLLDAATSQMLLEPNWVTNLEICDSVRQNDVTSKYALQAIR
KRMKDSNPHVCKYALVVLETCVKNCGEAFHEELASHEFMNEIRNLAQTGS
APVKEQVLSMLQAWNHAFRNNTKYQPILATYNLMKMEGYNFPAMSESDAM
FSSDTAPSWKEGDVCHLCRVKFGTFTRQHHCRACGEVFCNSCSSKKSIIP
KIGIEREVRVCDPCFDEINPNASSNNSGGAAASGKTDASGGGGGGDDELP
AEYLNSALAKEPQTKPKINENEAKQQEEDELQLALALSLSQEEAAKSQKK
NWSAPAAISSAPPSMSHTPTPSPYQSLGGSVSEVKSSSTSPYSSPYSSSM
TSLSEASKGSSELDKYLDRSYWEKKNQESATRAPSAPVVMETQQPAAQQQ
VMTNGDVYASVPYQTPQGAIADVVVEDEVEDENERFQSDAFVNTMEKSID
MFVQQMTKLQTKGKHIALDTSVQSLFHSLSAMHPQLLQLIEDEAESKAKY
EAMLQKLAVIREARETLDDMRAQHQEKMRQQELEQEMLRRMQMEQKLELM
RQQKQEYLEYQHQLQLQRQVELETYQREKMMQKQVPFNGPMGMMPGYGAG
YPMVPPGQQPIPTGYAAPDSLEGNIVMPPPYASLTKQQPGMQPALPTQDL
AASQQPGAGYQSAAIPKQPQQPPAGQWNQPPPPPPSSQPSAIPNQRVPAQ
QPGQQPMSLPPNTQQMPPQSQQQPPPPIPPHQPQHQAPLPASHHYHQQPP
PAQPQRPAQQTQPPPQGQFQQPTTQQQVPLAQQPNQFQQQQPQQFNQPPP
NNQQNIPPQQQTPQPQQVQPPNQQYQQPQQQMPQQFNQPPPNNQQNIPPQ
QQTPQPQQVQPPNQQYQQPQQQMAPQHQPQQTQIPPQQVQQPPQHVPQQA
QPLQQQVPQQGQQHPQQVAHQPQQPPQQPPQQIPQQIPQQPQQIPQQVPQ
PPQQVPQQPQQQYTQQPQQYGGQQPQPQYQQNPQQQGYYDQQQPQQPQQQ
AYEERMSANMKDLQLISFD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029857	XLOC_029857	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00046791	TCONS_00046791	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002014	VHS_dom
IPR000306	Znf_FYVE
IPR008942	ENTH_VHS
IPR013083	Znf_RING/FYVE/PHD
IPR024641	HRS_helical
IPR017455	Znf_FYVE-rel
IPR003903	UIM_dom
IPR011011	Znf_FYVE_PHD

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
molecular_function	GO:0046872	metal ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 510..563
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 611..1019
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..250
None	No IPR available	CDD	cd03569	VHS_Hrs_Vps27p	coord: 4..142 e-value: 1.46208E-56 score: 191.692
None	No IPR available	CDD	cd15720	FYVE_Hrs	coord: 158..218 e-value: 6.37972E-38 score: 135.977
IPR002014	VHS domain	SMART	SM00288	VHS_2	coord: 8..138 e-value: 2.5E-47 score: 173.2
IPR002014	VHS domain	PFAM	PF00790	VHS	coord: 7..138 e-value: 7.6E-40 score: 135.9
IPR002014	VHS domain	PROSITE	PS50179	VHS	coord: 15..142 score: 41.491
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 154..220 e-value: 2.0E-25 score: 100.5
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 161..218 e-value: 1.3E-16 score: 60.4
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 3..152 e-value: 8.4E-44 score: 148.5
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 8..142
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 153..224 e-value: 3.3E-19 score: 68.1
IPR024641	Hepatocyte growth factor-regulated tyrosine kinase substrate, helical domain	PFAM	PF12210	Hrs_helical	coord: 441..534 e-value: 1.1E-29 score: 102.6
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 159..219 score: 13.88
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 276..295 score: 9.729
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 158..222

Blast

[Close]

BLAST of TCONS_00046791-protein vs. Swiss-Prot (Human)
Match: HGS (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 4.892e-133
Identity = 298/810 (36.79%), Postives = 422/810 (52.10%), Query Frame = 0

Query:    1 MPGGKANFERLLDAATSQMLLEPNWVTNLEICDSVRQNDVTSKYALQAIRKRMKDSNPHVCKYALVVLETCVKNCGEAFHEELASHEFMNEIRNLAQT-GSAPVKEQVLSMLQAWNHAFRNNTKYQPILATYNLMKMEGYNFPAMSESDAMFSSDTAPSWKEGDVCHLCRVKFGTFTRQHHCRACGEVFCNSCSSKKSIIPKIGIEREVRVCDPCFDEINPNASSNNSGGAAASGKTDASGGGGGGDDELPAEYLNSALAKEPQTKPKINENEAKQQEEDELQLALALSLSQEEAAKSQKKNWSAPAAISSAPPS--MSHTPTPSPYQSLGGSVSEVKSSSTSPYSSPYSSSMTSLSEASKGSSELDKYLDRSYWEKKNQESATR-APSAPVVMETQQPAAQ--------QQVMTN----GDVY----ASVPYQTPQGAIADVVVEDEVEDENERFQSDAFVNTMEKSIDMFVQQMTKLQTKGKHIALDTSVQSLFHSLSAMHPQLLQLIEDEAESKAKYEAMLQKLAVIREARETLDDMRAQHQEKMRQQELEQEMLRRMQMEQKLELMRQQKQEYLEYQHQLQLQR--------QVELETYQREKMMQKQVP-FNGPMG---MMPGYGAGYPMVPPGQQPIPTGYAAPDSLEGNIVMPPPYASLTKQQP----GMQPALPTQDLAASQQPGAGYQSAAIPKQPQQPPAGQWNQPPPPPPSSQPSAIPN-QRVPAQQPGQQP-MSLPPNTQQMPPQSQQQPPPPIPPHQPQH-QAPLPASHHYHQQPPPAQP----QRPAQQTQPPPQG 767
            M  G   FERLLD ATSQ+LLE +W + L+ICD +RQ D  +KYA+ +I+K++ D NPHV  YAL V+E+ VKNCG+  H+E+A+ + M E+++L +      V+ ++L ++QAW HAFRN  KY+ +  TY +MK+EG+ FP   ESDAMF+++ AP W + + CH CRV+FG  TR+HHCRACG++FC  CSSK S IPK GIE+EVRVC+PC++++N  A                  G      ELP EYL S L+++ Q  PK   +E   QEE+ELQLALALS S+ E    +K+     +  +S P +  M    +  P  SL              YSSP +SS      A     EL +YL+R+YWEKK +E+     PSAPV +   +PAAQ          V+ N     D      +  P+  PQ          E E+ +E+F     +  ++ ++  FV +M     +G+ I  D++V SLF S++ MHPQLL+L+    E +  YE +  KLA IR+AR  L  +R +H+EK+R+   E E  R++Q+ QKLE+MRQ+KQEYLE Q QL +QR        Q+ LE  ++   M+ Q+P F  P      MP  G G    P G    P+ ++   S+EG+     P   +   QP    G  P++P+     S      Y + A   Q             P   S QP+     Q V +Q P   P +S PP +  M     Q       P+  Q+    LP+        PP QP    Q+P  Q   P  G
Sbjct:    1 MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKAE-----------------GKATSTTELPPEYLTSPLSQQSQLPPK--RDETALQEEEELQLALALSQSEAE----EKERLRQKSTYTSYPKAEPMPSASSAPPASSL--------------YSSPVNSSAPL---AEDIDPELARYLNRNYWEKKQEEARKSPTPSAPVPL--TEPAAQPGEGHAAPTNVVENPLPETDSQPIPPSGGPFSEPQ------FHNGESEESHEQF-----LKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQEKERQMRLEQQKQTVQMRAQMPAFPLPYAQLQAMPAAG-GVLYQPSGPASFPSTFSPAGSVEGS-----PMHGVYMSQPAPAAGPYPSMPSTAADPSMVSAYMYPAGATGAQAAPQAQAGPT-ASPAYSSYQPTPTAGYQNVASQAPQSLPAISQPPQSSTMGYMGSQSVSMGYQPYNMQNLMTTLPSQD---ASLPPQQPYIAGQQPMYQQMAPSGG 747

The following BLAST results are available for this feature:

BLAST of TCONS_00046791-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00046791-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HGS	4.892e-133	36.79	Hepatocyte growth factor-regulated tyrosine kinase...	[more]

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TCONS_00046791-protein (polypeptide) - C. hemisphaerica