TCONS_00046799-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00046799-protein
Unique Name	TCONS_00046799-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	369

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00046799-protein ID=TCONS_00046799-protein|Name=TCONS_00046799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MESSQYFEEDIELNATQQAILNAPAGSGYALTKRGIYTHWPFNKPIAYHI
DDVYEKSQYHRVKLENALKDYEAQTCLRFVKRTNERQYINFGSGKGCSSM
VGMQANGNFIRLARGCFSHGTLLHEIAHSLGIWHEQNRPDRDLYIKVRPE
NMACCSYQFRKMHASHIDSLGFPYDLESMMHYSSRAFGNGKGPTIEPLDK
TKSIGQRRGFSRIDVMQINAMYCKDSPNTPPPTNPPTQPPTVPTSGPQGK
VLKHASSNMCLALDRNNELIFSSNCQTRFQISEGKFWHPKGWLCAEPLSR
QSESPIRFKTNCKEGFSKVNEGGRNFVIRHKGTGKCIHPNRGSSNPSEGT
KAIIFHQCSAGSRIQFVEA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029860	XLOC_029860	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00046799	TCONS_00046799	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001506	Peptidase_M12A
IPR006026	Peptidase_Metallo
IPR024079	MetalloPept_cat_dom
IPR034035	Astacin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..250
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 37..224
IPR001506	Peptidase M12A	PRINTS	PR00480	ASTACIN	coord: 64..82 score: 32.63 coord: 135..152 score: 43.61 coord: 173..188 score: 48.65 coord: 116..134 score: 44.74 coord: 210..223 score: 36.67
IPR001506	Peptidase M12A	PFAM	PF01400	Astacin	coord: 39..224 e-value: 2.1E-54 score: 183.9
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 36..178 e-value: 1.5E-30 score: 117.5
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 32..226 e-value: 3.6E-48 score: 163.6
IPR034035	Astacin-like metallopeptidase domain	CDD	cd04280	ZnMc_astacin_like	coord: 43..222 e-value: 1.68803E-68 score: 214.742

Blast

[Close]

BLAST of TCONS_00046799-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.231e-27
Identity = 77/220 (35.00%), Postives = 107/220 (48.64%), Query Frame = 0

Query:    7 FEEDIELNATQQAILNAPAGSGYALTKRGIYTHWPFNKPIAYHIDDVYEKSQYHRVKLENALKDYEAQTCLRFVKRTNERQYINFGSGKGCSSMVGMQANG-NFIRLARGCFSHGTLLHEIAHSLGIWHEQNRPDRDLYIKVRPEN-MACCSYQFRKMHASHIDSLGFPYDLESMMHYSSRAFGNGKGPTI--EPLDKTKSIGQRRGFSRIDVMQINAMY 222
            FE DI L+  Q  I N+  G  Y          WP   P  Y ++D  E +   +  + NA + Y  +TC+ F     E  YI+   G GC S VG +  G   + +   C    T+ HE  H+LG WHEQ+R DRD Y+++  +  ++   + F        DSL  PYD  S+MHYS  AF NG  PTI     D    IGQR  FS  D++++N +Y
Sbjct:   49 FEGDIRLDRAQ--IRNSIIGEKY---------RWPHTIP--YVLEDSLEMNA--KGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLY 253

The following BLAST results are available for this feature:

BLAST of TCONS_00046799-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00046799-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MEP1B	1.231e-27	35.00	Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=...	[more]

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TCONS_00046799-protein (polypeptide) - C. hemisphaerica