TCONS_00046838-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046838-protein
Unique NameTCONS_00046838-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046838-protein ID=TCONS_00046838-protein|Name=TCONS_00046838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
NKVNPGLSNCERNTKECFKLQAKYKFFLAVENFYCTDYVTEKFYEESLRK
GLVPVMINGGKLRNRRIAPPHSYINVLDFKNAKELADYINYLDRNQTAYL
EYHKWRRDYEIVPHNYKCNLCRSINKKFNRVKRWRAKNLGDFWSPKMCKR
YENKAFQKYLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029882XLOC_029882Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046838TCONS_00046838Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 10..139
e-value: 3.6E-38
score: 131.0
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 10..126

Blast
[Close]
BLAST of TCONS_00046838-protein vs. Swiss-Prot (Human)
Match: FUT4 (Alpha-(1,3)-fucosyltransferase 4 OS=Homo sapiens GN=FUT4 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 7.235e-21
Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 0 
Query:   22 AKYKFFLAVENFYCTDYVTEKFYEESLRKGLVPVMINGGKLRNRRIAPPHSYINVLDFKNAKELADYINYLDRNQTAYLEYHKWRRDYEIVPHNY----KCNLCRSINKKFNRVKRWR 135
            A+YKF+LA EN    DY+TEK +  +L  G VPV++   +    R  P  ++I+V DF +A  LA Y+ +LDRN   Y  Y  WRR Y +   ++     C +C+++ +  +R K  R
Sbjct:  405 ARYKFYLAFENSQHLDYITEKLWRNALLAGAVPVVLGPDRANYERFVPRGAFIHVDDFPSASSLASYLLFLDRNPAVYRRYFHWRRSYAVHITSFWDEPWCRVCQAVQRAGDRPKSIR 522
The following BLAST results are available for this feature:
BLAST of TCONS_00046838-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT47.235e-2136.44Alpha-(1,3)-fucosyltransferase 4 OS=Homo sapiens G... [more]
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