TCONS_00046856-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046856-protein
Unique NameTCONS_00046856-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046856-protein ID=TCONS_00046856-protein|Name=TCONS_00046856-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
MGSCNLTLNIDNRHQIGACSGKHNSIKECRFLSTSPKVSGFSVLTKIEIN
LSPWVSIXTAGGFEFPMMLRLTITKCQAFVVVYSVGSSKSLEVAKKLIAE
VSEQKGQNFPCVLVGNKKDLELTGEREVSFEKGLQTAVQHGCSYIEVSAK
DDENITXNKFCNIFIFLYICKLCDKSILTCYF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029900XLOC_029900Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046856TCONS_00046856Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 35..176
e-value: 7.6E-8
score: -0.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 64..176
e-value: 1.6E-5
score: -40.9
NoneNo IPR availableGENE3D3.40.50.300coord: 64..163
e-value: 7.3E-22
score: 76.8
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 58..156
e-value: 2.0E-21
score: 76.2
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 1..178
score: 11.142
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 57..156

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046856-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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