TCONS_00046915-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046915-protein
Unique NameTCONS_00046915-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1129

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046915-protein ID=TCONS_00046915-protein|Name=TCONS_00046915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1129bp
MGTSKNKKKQKRFEWLDDALLHQRQGFTYPQVKPSLVYYETPASLYRKVP
VVPCPTDVVQLSTTKLGTKRYPVPPHTEFDVTNINVPASEYNFLHDPHLK
DYLNSPLVRKRLYEKGLITKAGYVKCTIKEFNDYRQWVRKLKLDAIDQDW
HLQKNDQSLIPSTHTNNEAAQLTKQRQERAKELSTDKKKQEEMNRQRLLK
NLADKDDAIANKKRERERKMARQQRLKKEEYKVKIDAKAKKESEHKRYRL
KILLRSKRLIRDCQNRIQSLQDQRKMEKEERARQLYERRQQYCHGKMEED
EQNREVQMEKRKVSINERENVYQKERRRSDVYMLQHHQENKDNARKHLEE
ASQFLNRIEEKKEKEIQKWRTKLKSIEQRERLLEFYRQKRLYDENKGKRR
KRHDDQRTSVWDVDNVLLKHILNDLNEKEREELEVFAKEEDDIIKEEEEI
SDQEDVDVLSDEVEDDVVCELPESKDNLDVGLIQTQPSFITFGRILLDET
ENVYHQKSRHSMMASTGGGPHAPLLDIPGLLIEHCKSAHEHLPVVDSIHD
PDSMEGSVETVINVTENNEDDIIEGDLQEEADITCYSNESFCSHRSSYEI
LVIPSRQSRSSLDVLVNTPLESRATLVHLVNSEPVLVTSAVYSSATLACT
AQQLVQGSLMNAATQLGYEEKEILRALDLLPESSSEVEIEEVVETPLPLV
SQSIVDYSKEITEMSLIAAAMSLGYDRHEISSALGVDMDTSGDESSIADG
IEHADSIALFNSKYSDTVKDIAVTAIKQAAINLGYSEKEADSALSVVVAN
HESDTSVSVIAAELAKTAIINASNDLGLQRESVQSLVDEVNTRVSSMSIN
IQSNYSLKSRPCTRDAPYVVVTHNALRNAALSLGFSEAEVNSKIGEEKKL
NSRQLNIMSSQPSPTSEYLMNLHTWSSNKMRVQGNSYYECLASASEIITR
SVINSALEIVSNNTEEVIKKDYTTANSQYELKLEMTAKEIVATAIDNAKK
IVSSEDNKDSNEKLQRFALKYSMMIIGSSAKRLGYEDKQILDALTKDINY
SSRNREGLDRHPSVLVKFNEVSISEAIMVNAVSDRVVRGRRNSIKERILT
PLPSTTASEEMSGDEXSSVDVEIPSRSES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029931XLOC_029931Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046915TCONS_00046915Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..280
NoneNo IPR availableCOILSCoilCoilcoord: 195..229
NoneNo IPR availableCOILSCoilCoilcoord: 341..379
NoneNo IPR availableCOILSCoilCoilcoord: 436..456
NoneNo IPR availableGENE3D1.10.8.10coord: 776..814
e-value: 0.0016
score: 18.5

Blast
[Close]
BLAST of TCONS_00046915-protein vs. Swiss-Prot (Human)
Match: FSIP2 (Fibrous sheath-interacting protein 2 OS=Homo sapiens GN=FSIP2 PE=2 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 1.945e-16
Identity = 77/265 (29.06%), Postives = 127/265 (47.92%), Query Frame = 0 
Query:   48 KVPVVPCPTDVVQLSTTKLGTKRYPVPPHTEFDVTN--INVPASEYNFLHDPHLKDYLNSPLVRKRLYEKGLITKAGYVKCTIKEFNDYRQWVRKLKLDA----IDQDWHLQKNDQSLIPSTHTNNEAAQLTKQRQERAKELSTDKKKQEEMNRQRLLKNLADKDDAIANKKRE-RERKMARQQRLKKEEYKVKIDAKAKKESEHKRYRLKILLRSKRLIRDCQNRIQSLQDQRKMEKEERARQLYERRQQYCHGKMEEDEQNRE 305
            K+PV+P    V    TT  G K +   P   F++T+    +  ++Y  LHDPHLK Y     + KRL + G IT    V CT++E N YRQ++  LKLD     I +   L K   + IP  +   +   + + +    KE +   K QE + R R L  ++ K + +     E R   M R++R ++E  + K+  + K E E K   + +L R    ++  + RI+  Q + + E + + + L E++  Y   KM++   N E
Sbjct:   56 KLPVIPGSNAV--FYTTNFGEKLFR--PSYGFNLTDPYCRLLENQYKSLHDPHLKAYYKRKDILKRLKKGGYITSNNKVVCTLRELNKYRQYLTSLKLDFERNYIKEQRILAKQLHN-IPENNQIPQHCDVAQVQNWLLKEGTESIKDQERLMRHRYLDMISRKLEQLERTAEEQRLFLMDREERRQREHTRRKLTLRRKIEEEWKTKEMLLLTRMAEDVKR-EERIEEQQHRNREESDRKKQDLLEKKMAYHLQKMQDTGFNGE 314
The following BLAST results are available for this feature:
BLAST of TCONS_00046915-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FSIP21.945e-1629.06Fibrous sheath-interacting protein 2 OS=Homo sapie... [more]
back to top