TCONS_00046939-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046939-protein
Unique NameTCONS_00046939-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1239

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046939-protein ID=TCONS_00046939-protein|Name=TCONS_00046939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1239bp
MASTSPYQIASLLDKMSSSDKDFRYMATNDLMNELQNDSIKLDDDRERMV
VQSIVRLLEDKNGEVQNLAVKCLGPLVKKVKEYQVEWIVDNLCSNMASKN
EQLRDISSIGLKTVISELPSASSPLSSSICKRITGKLTDTITKTEDQSVQ
LEALDILADLLNRFGGLLVSFHSSILKCTLPLLNSQRLAIRKRAIIALSQ
LVMSACNQLFVELMDFLIKELKTKKSHLDVRTFIQCIGSICRQSGHKVGP
YLDQIIPSVVEYSKVESDDELRETCIQSFESFICKCPKEVTSYISQITEL
CLEYLCYDPNYNYGDDEDDEGDEAMNEDDDDDELDESDEEYSDDDDMSWK
VRRAAAKCLGSTFRSRHELLSDFYTKVSPKLIARFKEREENVKSDIFNAF
TALLRQTRPLLPAQQEDNSPLSMLQGQVNAIIKATHKLMQEKSTKTRQGC
FGLQTELVNVLPGALTNHIHLIIPGILYSLNERTSTSNMKIDALSFLGVI
LQQHESSIFYPHIPKLIPVLVSSIKDPFYKIAAEALAVTQTIIRVIRPVD
RDSTFDHKPYIKDIYSAVLLRLQAADIDQEIKEKSITCMGQLLANAGDSL
TDQLPQCLPIFLDRLKNEITRLTTVRAVIMVAESPLSVDLSLLLNDSIPL
LSSFLRKNHRALKLTTLSCLITLTKNHGKSMSAVHFKAVLVELPALVNDA
DLHISQLALNLVTPIIKKEKTLIGSLKNSLLPEALKLTQSPLLQGIALTS
MVSFLNELVLSGQPGFGYKDLLSMLTAPIYDKPENGTTPNLHKMAFHSIA
KCVAALTVTCRKEVEEIVARFVQHIVSPSSDSVRLFSLLAVGEIGAHIDL
SKKADLKDVIVGSFTSDSEDIKSAASYSLGHICVGNLNVYLPFVLQEIES
NPKRQYLLLHSLKEIISWQSSKPTGIEILKPFLPSIWKLLFSNSENYEEG
TRNVVSECLGKLALLDPPNLLPQLQEHLSSTSPQMRSTVITAFKFTIVDQ
PQSIDPYLINYLQFFLEPIVDTDLNVRRVSLTTLNSAAHNKPSLIRDILP
NILPHLYTETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSC
LDRLDIFEFLNHVEAGLKDHYDIKMLTYLMLVRLSSLCPNAVLQHLDRIV
EPLRTTINSKVKANSVKQEYEKQDELKRSALRAISALCTIPDANTHPNLS
DFLTQIRASADTAAMFEAVRRDPTTSSSSTDVSMGMSYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029943XLOC_029943Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046939TCONS_00046939Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013932TATA-bd_TIP120
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..1214
e-value: 2.9E-263
score: 875.8
IPR013932TATA-binding protein interacting (TIP20)PFAMPF08623TIP120coord: 1044..1206
e-value: 3.5E-65
score: 218.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..346
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..1210

Blast
BLAST of TCONS_00046939-protein vs. Swiss-Prot (Human)
Match: CAND1 (Cullin-associated NEDD8-dissociated protein 1 OS=Homo sapiens GN=CAND1 PE=1 SV=2)

HSP 1 Score: 1496.1 bits (3872), Expect = 0.000e+0
Identity = 765/1241 (61.64%), Postives = 969/1241 (78.08%), Query Frame = 0
Query:    1 MASTSPYQIASLLDKMSSSDKDFRYMATNDLMNELQNDSIKLDDDRERMVVQSIVRLLEDKNGEVQNLAVKCLGPLVKKVKEYQVEWIVDNLCSNMASKNEQLRDISSIGLKTVISELPSASS--PLSSSICKRITGKLTDTITKTEDQSVQLEALDILADLLNRFGGLLVSFHSSILKCTLPLLNSQRLAIRKRAIIALSQLVMSACNQLFVELMDFLIKELKTKKSHLDVRTFIQCIGSICRQSGHKVGPYLDQIIPSVVEYSKVESDDELRETCIQSFESFICKCPKEVTSYISQITELCLEYLCYDPNYNYGDDEDDEGDEAMNEDDDDDELDESDEEYSDDDDMSWKVRRAAAKCLGSTFRSRHELLSDFYTKVSPKLIARFKEREENVKSDIFNAFTALLRQTRPLLP------AQQEDNSPLSMLQGQVNAIIKATHKLMQEKSTKTRQGCFGLQTELVNVLPGALTNHIHLIIPGILYSLNERTSTSNMKIDALSFLGVILQQHESSIFYPHIPKLIPVLVSSIKDPFYKIAAEALAVTQTIIRVIRPVDRDSTFDHKPYIKDIYSAVLLRLQAADIDQEIKEKSITCMGQLLANAGDSLTDQLPQCLPIFLDRLKNEITRLTTVRAVIMVAESPLSVDLSLLLNDSIPLLSSFLRKNHRALKLTTLSCLITLTKNHGKSMSAVHFKAVLVELPALVNDADLHISQLALNLVTPIIKKEKTLIGSLKNSLLPEALKLTQSPLLQGIALTSMVSFLNELVLSGQPGFGYKDLLSMLTAPIYDKPENGTTPNLHKMAFHSIAKCVAALTVTCRKEVEEIVARFVQHIV-SPSSDSVRLFSLLAVGEIGAHIDLSKKADLKDVIVGSFTSDSEDIKSAASYSLGHICVGNLNVYLPFVLQEIESNPKRQYLLLHSLKEIISWQSSKPTGIEILKPFLPSIWKLLFSNSENYEEGTRNVVSECLGKLALLDPPNLLPQLQEHLSSTSPQMRSTVITAFKFTIVDQPQSIDPYLINYLQFFLEPIVDTDLNVRRVSLTTLNSAAHNKPSLIRDILPNILPHLYTETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEAGLKDHYDIKMLTYLMLVRLSSLCPNAVLQHLDRIVEPLRTTINSKVKANSVKQEYEKQDELKRSALRAISALCTIPDANTHPNLSDFLTQIRASADTAAMFEAVRRDPTTSSSSTDV 1232
            MAS S Y I++LL+KM+SSDKDFR+MATNDLM ELQ DSIKLDDD ER VV+ I++LLEDKNGEVQNLAVKCLGPLV KVKEYQVE IVD LC+NM S  EQLRDISSIGLKTVI ELP ASS   L++++CK+ITG+LT  I K ED SVQLEALDI+AD+L+R GGLLV+FH SIL C LP L S RLA+RKR IIAL  LVMS  N +FV+L++ L+ EL    S    RT+IQCI +I RQ+GH++G YL++IIP VV++  V+ DDELRE CIQ+FESF+ +CPKEV  ++S I  +CL+YL YDPNYNY D+++DE   AM+ D  DD+   SD+EYSDDDDMSWKVRRAAAKCL +   +RHE+L +FY  VSP LI+RFKEREENVK+D+F+A+ +LL+QTRP+        A ++  +PL+MLQ QV  I+KA HK M+EKS KTRQ CF + TELVNVLPGALT HI +++PGI++SLN+++S+SN+KIDALS L VIL  H   +F+PH+  L+P +V+ + DPFYKI +EAL VTQ +++VIRP+D+ S+FD  PYIKD+++  + RL+AADIDQE+KE++I+CMGQ++ N GD+L   LP  L IFL+RLKNEITRLTTV+A+ ++A SPL +DL  +L + +P+L+SFLRKN RALKL TLS L  L KN+  S++A    AVL ELP L++++D+H+SQ+A++ +T + K   + +  +  S+L E + L +SPLLQG AL++M+ F   LV++G    GY DLL MLT P+Y +    +T   HK +++SIAKCVAALT  C KE   +V +F+Q +  S S+DS+RL +LL++GE+G HIDLS + +LK VI+ +F+S SE++KSAASY+LG I VGNL  YLPFVLQEI S PKRQYLLLHSLKEIIS  S+   G   LKP++ +IW LL  + E  EEGTRNVV+ECLGKL L+DP  LLP+L+ +L S S   RS+V+TA KFTI D PQ IDP L N +  FL+ + D DLNVRRV+L T NSAAHNKPSLIRD+L  +LPHLY ETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVE GLKDHYDIKMLT+LMLVRLS+LCP+AVLQ LDR+VEPLR T  +KVKANSVKQE+EKQDELKRSA+RA++AL TIP+A   P +S+F +QI ++ + AA+FE++++D    SSST++
Sbjct:    1 MASAS-YHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVD-DDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDEN--AMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQ----STALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIIS--SASVVG---LKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQKD----SSSTNL 1224          
The following BLAST results are available for this feature:
BLAST of TCONS_00046939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAND10.000e+061.64Cullin-associated NEDD8-dissociated protein 1 OS=H... [more]
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