TCONS_00047013-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047013-protein
Unique NameTCONS_00047013-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1413

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047013-protein ID=TCONS_00047013-protein|Name=TCONS_00047013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1413bp
QLAVVGEEILIFYNDHSSFASLLEMMQSERERSEESSPLLYHISLVRLLA
SCTEGKNVYTEIKCHSLLPLDDIVRIVTHPDCIPEVKSAYVHFLNHCYVD
TEVEMKEIYSSSHIWTLFEDFMVDMGKVATTTHDRKHADTLLEDYVTTVI
PEILTVFFNSPFSEASTTIKARQPIFVSLLSALFRLSQCQWMTGTQKYQI
ETCIQNLLEIAKPRGIAIPSDLEVEVQSLVTKSKLVLRHSRHWLSHRQRK
DSVMLMSMSKDYRNIIEGLQDIVALLEDQLRPLVEAESSLLVDIMYHPHL
LFAVDSENRARANNGGFIKKLIVHTNSLMSGDENLCIEVLNALQQMLNKE
SDFGEKGDRLRTSLIMLYFNADELPYKTKEQYKKEDDGTSSIFLYRANRT
LYDMQCMMDINGATDLVIDLIMADPSPNIFLECIQLAISLLDGGNGTVQK
SFYKRFLYSKTEAFFQYIYDQITEAKDEIRSTITMNTDSVARKREEEKEE
KAKDPMTRRETINLLKRDSKDTHVLGMLVSLSDDVKEQLTDAAQQTNKAY
SAVRKGREGDNSEGSKGPFPESVKSSSVGSYLAPEIVTMQPILRFLQLLC
ENHNTEMQNYLRKQEHKKSYNMVQETLTFLDCICGSTTGGLGLLGLYINE
HNVGLINQSLCTLTEYCQGPCHDNQNAIVSHECNGMDIIIALVLNEINPL
SKHRMDLVMELKDNASKLLLAIMESRHDSENAEKILYNMSPNTLVEVCKQ
VYHQEEIDTATDSEISPRDVGHNIYILAYQLSQHNTELSDLLKQDLEEGE
DEAETAHADHQATFVQSDPALQFYSKSTAQIEVVRKDRVLEQIIYPVPSI
CEFLTDKKKDEVYYTCERDEHNSKVADFFERTEDLYKEMIWQKRLRDKPW
LFWFSHNWQIWETIALNLAIVINLLVAFFYPFSNDAMDLDHRLSILIWLA
IFVSFIVCVTVPRLSGIRTLAGAVILRMIFTLGTIPTLNLIGAFNLLNRF
VLTVSYIGNSGILSGTSFQRLISDKFLLMMVNCLIICGLGLFVHEFFYCV
LVIDVIAREETLLNVVRSVTRNVRSILLTTLLALVLVYLFSIIGFLFFQE
DFVMETEPLKVEALPNAFCQANDTNCNSSALLPNILKKDGGASSPSSTEE
ESDGKVQENACDSLLMCIVFTMNNGLRSGGGIGDVLRAPSRGDRYFTARV
IYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQTKEEILKNSCFICGLK
RADFDNRTVTFEQHINNEHNMWDYLYFIVLIKVKDPTEFTGPESYVAEMI
KNNNLDWFPHLRCMSLSVDDAESEQNEIRNLQIQLESTNQIVHTLSKQLT
ELREQMIEQRKNKQKLGLLQLPAHRQQSSNYGNTSGYQPRHNHVITSTTN
QITVNGSEILQMQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029996XLOC_029996Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047013TCONS_00047013Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013662RIH_assoc-dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1321..1362
NoneNo IPR availableCOILSCoilCoilcoord: 593..613
NoneNo IPR availableGENE3D1.10.287.70coord: 888..1231
e-value: 5.6E-5
score: 22.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 489..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..575
IPR013662RyR/IP3R Homology associated domainPFAMPF08454RIH_assoccoord: 586..692
e-value: 2.4E-31
score: 107.5
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 909..1233
e-value: 8.8E-19
score: 67.6

Blast
BLAST of TCONS_00047013-protein vs. Swiss-Prot (Human)
Match: ITPR1 (Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens GN=ITPR1 PE=1 SV=3)

HSP 1 Score: 1432.16 bits (3706), Expect = 0.000e+0
Identity = 748/1459 (51.27%), Postives = 1001/1459 (68.61%), Query Frame = 0
Query:    1 QLAVVGEEILIFYNDHSSFASLLEMMQSERERSEESSPLLYHISLVRLLASCTEGKNVYTEIKCHSLLPLDDIVRIVTHPDCIPEVKSAYVHFLNHCYVDTEVEMKEIYSSSHIWTLFEDFMVDMGKVATTTHDRKHADTLLEDYVTTVIPEILTVFFNSPFSEASTTIKARQPIFVSLLSALFRLSQCQWMTGTQKYQIETCIQNLLEIAKPRGIAIPSDLEVEVQSLVTKS-KLVLRHSRHW-LSHRQ--RKDSVMLMSMSKDYRNIIEGLQDIVALLEDQLRPLVEAESSLLVDIMYHPHLLFAVDSENRARANNGGFIKKLIVHTNSLMS-GDENLCIEVLNALQQMLNKESDFGEK---------------------------------------GDRLRTSLIMLYFNADELPYKTKEQYKKEDDG----------------TSSIFLYRANRTLYDMQCMMDINGATDLVIDLIMADPSPNIFLECIQLAISLLDGGNGTVQKSFYKRFLY-SKTEAFFQYIYDQITEAKDEIRSTITMNTDSVARKREEEK-------EEKAKDPMTRRETINLLKRDSKDTHVLGMLVSLSDDVKEQLTDAAQQTNKAYSAVRKGREGDN----SEGSKGPFPESVKSSSVGSYLAPEIVTMQPILRFLQLLCENHNTEMQNYLRKQEHKKSYNMVQETLTFLDCICGSTTGGLGLLGLYINEHNVGLINQSLCTLTEYCQGPCHDNQNAIVSHECNGMDIIIALVLNEINPLSKHRMDLVMELKDNASKLLLAIMESRHDSENAEKILYNMSPNTLVEVCKQVYHQEEID-----TATDSEISPRDVGHNIYILAYQLSQHNTELSDLLKQDLEEGEDEAETAHADHQATFVQSDPALQFYSKSTAQIEVVRKDRVLEQIIYPVPSICEFLTDKKKDEVYYTCERDEHNSKVADFFERTEDLYKEMIWQKRLRDKPWLFWFSHNWQIWETIALNLAIVINLLVAFFYPFSN-DAMDLDHRLSILIWLAIFVSFIVCVTVPRLSGIRTLAGAVILRMIFTLGTIPTLNLIGAFNLLNRFVLTVSYIGNSGILSGTSFQRLISDKFLLMMVNCLIICGLGLFVHEFFYCVLVIDVIAREETLLNVVRSVTRNVRSILLTTLLALVLVYLFSIIGFLFFQEDFVMETEPLKVEALPN-AFCQANDTNCNSSALLPNILKKDGG--ASSPSSTEE----ESDGKVQENACDSLLMCIVFTMNNGLRSGGGIGDVLRAPSRGDRYFTARVIYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQTKEEILKNSCFICGLKRADFDNRTVTFEQHINNEHNMWDYLYFIVLIKVKDPTEFTGPESYVAEMIKNNNLDWFPHLRCMSLSVDDAESEQNEIRNLQIQLESTNQIVHTLSKQLTELREQMIEQRKNKQKLGLLQLPAH 1374
            +L   GE++L+FYND +SF +L++MM+SER+R +E+SPL+YHI LV LLA CTEGKNVYTEIKC+SLLPLDDIVR+VTH DCIPEVK AY++FLNHCYVDTEVEMKEIY+S+H+W LFE+F+VD+ +    T DRKHAD++LE YVT ++  I+T FF+SPFS+ STT++ RQP+FV LL  +FR+  C W+  +QK  +E+CI+ L ++AK R IAIP DL+ +V +L  KS  +V + + +W LS R   R+DSV+  + S+DYRNIIE LQDIV+ LED+LRPLV+AE S+LVD+++ P LLF  +++ R +  +GGFI KLI HT  L+   +E LCI+VL  L++M+ K+  +GEK                                       G+ LR  L+  Y+  +  P   +E      +G                + S  + R   +L ++QC +D  GA++LVIDLIM   S  +F E I LAI+LL+GGN T+Q SF+ R     K+E FF+  YD++  A+ EI++T+T+NT  +  K+++++        +KAK+P T+                      ++++V++QL +A+  T KA++  R+  + D+     EG++     +   +     ++  I  MQPILRFLQLLCENHN ++QN+LR Q +K +YN+V ETL FLDCICGSTTGGLGLLGLYINE NV LINQ+L +LTEYCQGPCH+NQN I +HE NG+DII AL+LN+INPL K RMDLV+ELK+NASKLLLAIMESRHDSENAE+ILYNM P  LVEV K+ Y Q E++        D   SPR+VGHNIYILA+QL++HN EL  +LK   +                 V  D AL+FY+K TAQIE+VR DR +EQI++PVPSICEFLT + K  +YYT ERDE  SK+ DFF R+EDL+ EM WQK+LR +P L+W + N   W +I+ NLA+++NLLVAFFYPF       L+   S L+W A+ +S  + + +P+  GIR L  + ILR+IF++G  PTL L+GAFN+ N+ +  +S++GN G  +   ++ ++ D   L  +  L+IC +GLFVHEFFY +L+ D++ REETLLNV++SVTRN RSI+LT +LAL+LVYLFSI+G+LFF++DF++E     V+ LPN         +  S  L  ++ + + G   SSP+  EE    E   + +E+ C++LLMCIV  +++GLRSGGG+GDVLR PS+ +  F ARVIYDLLFFF+VIIIVLNLIFGVIIDTFADLRSEKQ KEEILK +CFICGL+R  FDN+TVTFE+HI  EHNMW YL FIVL+KVKD TE+TGPESYVAEMIK  NLDWFP +R MSL   D+E EQNE+RNLQ +LEST ++V  LS QL+EL++QM EQRK KQ++GLL  P H
Sbjct: 1343 ELVNSGEDVLVFYNDRASFQTLIQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCNWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHSIVQKTAMNWRLSARNAARRDSVL--AASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKLISIDELDNAELPPAPDSENATEELEPSPPLRQLEDHKRGEALRQVLVNRYY-GNVRPSGRRESLTSFGNGPLSAGGPGKPGGGGGGSGSSSMSRGEMSLAEVQCHLDKEGASNLVIDLIMNASSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDDEVDRDAPSRKKAKEPTTQ----------------------ITEEVRDQLLEASAATRKAFTTFRREADPDDHYQPGEGTQA----TADKAKDDLEMSAVITIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPCHENQNCIATHESNGIDIITALILNDINPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRPKELVEVIKKAYMQGEVEFEDGENGEDGAASPRNVGHNIYILAHQLARHNKELQSMLKPGGQ-----------------VDGDEALEFYAKHTAQIEIVRLDRTMEQIVFPVPSICEFLTKESKLRIYYTTERDEQGSKINDFFLRSEDLFNEMNWQKKLRAQPVLYWCARNMSFWSSISFNLAVLMNLLVAFFYPFKGVRGGTLEPHWSGLLWTAMLISLAIVIALPKPHGIRALIASTILRLIFSVGLQPTLFLLGAFNVCNKIIFLMSFVGNCGTFT-RGYRAMVLDVEFLYHLLYLVICAMGLFVHEFFYSLLLFDLVYREETLLNVIKSVTRNGRSIILTAVLALILVYLFSIVGYLFFKDDFILE-----VDRLPNETAVPETGESLASEFLFSDVCRVESGENCSSPAPREELVPAEETEQDKEHTCETLLMCIVTVLSHGLRSGGGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERDKFDNKTVTFEEHIKEEHNMWHYLCFIVLVKVKDSTEYTGPESYVAEMIKERNLDWFPRMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTNLSGQLSELKDQMTEQRKQKQRIGLLGHPPH 2749          
The following BLAST results are available for this feature:
BLAST of TCONS_00047013-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ITPR10.000e+051.27Inositol 1,4,5-trisphosphate receptor type 1 OS=Ho... [more]
back to top