TCONS_00047033-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047033-protein
Unique NameTCONS_00047033-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047033-protein ID=TCONS_00047033-protein|Name=TCONS_00047033-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MVKIIKIAMFSLFITIIYGLLLPIPLCDTRRNLTPQQVKLCKKYQQKHLE
LLLDAKFISEFECEQQFSQRRWNCTLPPPSSVSPLLLPKMPLATRETAYI
YASTSAAIMHTISRGCMEGKLANHCSCSKEERPGSLKQSDVWGGCGDNLP
YGYQFSKKFTDAGEQLSEETLSKFSRVLMNLHNNEAGRWAVYEKSFVQCR
CIGVSTNCAINTCYRQLGRFNKVAKHLENLYRSSVQVELKQGNDDGNSKN
TEIRLVETNPNYNKYSAKDMVYIKDSPSYCEKKLSIGSYGVAGRSCTKTG
NSVNDCNMLCCDRGYYSRREIVKAKCGCKLIWCCEVKCKTCEKEQNNHYC
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030003XLOC_030003Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047033TCONS_00047033Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 95..109
score: 45.74
coord: 200..214
score: 46.07
coord: 269..280
score: 52.6
coord: 140..152
score: 55.36
IPR005817WntSMARTSM00097wnt1_3coord: 29..351
e-value: 4.5E-76
score: 268.7
IPR005817WntPFAMPF00110wntcoord: 31..351
e-value: 9.8E-86
score: 288.0

Blast
[Close]
BLAST of TCONS_00047033-protein vs. Swiss-Prot (Human)
Match: WNT5A (Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.199e-81
Identity = 131/329 (39.82%), Postives = 190/329 (57.75%), Query Frame = 0 
Query:   25 PLCDTRRNLTPQQVKLCKKYQQKHLELLLDAKFISEFECEQQFSQRRWNCTLPPPSSVSPLLLPKMPLATRETAYIYASTSAAIMHTISRGCMEGKLANHCSCSKEERPGSLKQSDVWGGCGDNLPYGYQFSKKFTDAGEQ--LSEETLSKFSRVLMNLHNNEAGRWAVYEKSFVQCRCIGVSTNCAINTCYRQLGRFNKVAKHLENLYRSSVQVELKQGNDDGNSKNTEIRLVETNPNYNKYSAKDMVYIKDSPSYCEKKLSIGSYGVAGRSCTKTGNSVNDCNMLCCDRGYYSRREIVKAKCGCKLIWCCEVKCKTCEKEQNNHYCK 351
            PLC     L+  Q KLC  YQ  H++ + +       EC+ QF  RRWNC+    +SV   +   M + +RETA+ YA ++A +++ +SR C EG+L+  C CS+  RP  L +  +WGGCGDN+ YGY+F+K+F DA E+  +  +   + +R+LMNLHNNEAGR  VY  + V C+C GVS +C++ TC+ QL  F KV   L+  Y S+  + L          N+  +LV+ N  +N  + +D+VYI  SP YC +  S GS G  GR C KT   ++ C ++CC RGY   + +   +C CK  WCC VKCK C +  +   CK
Sbjct:   67 PLCSQLAGLSQGQKKLCHLYQD-HMQYIGEGAKTGIKECQYQFRHRRWNCSTVDNTSVFGRV---MQIGSRETAFTYAVSAAGVVNAMSRACREGELST-CGCSRAARPKDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMRL----------NSRGKLVQVNSRFNSPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTVQTERCHCKFHWCCYVKCKKCTEIVDQFVCK 380
The following BLAST results are available for this feature:
BLAST of TCONS_00047033-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT5A1.199e-8139.82Protein Wnt-5a OS=Homo sapiens GN=WNT5A PE=1 SV=2[more]
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