TCONS_00047118-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047118-protein
Unique NameTCONS_00047118-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047118-protein ID=TCONS_00047118-protein|Name=TCONS_00047118-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
MVMLKNIPRVLSPELLSVLARMGHGDEIVLADANFPSASTAKAGPELIRA
DGHGCMEILKGVLKLLPLDMYVEAPVMLMDPTESDKVKGIKTPIWEEYKA
AVNQSEGKNISVSLIERFEFYKRAEKAFAVVATGENALYGNIILKKGVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030043XLOC_030043Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047118TCONS_00047118Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007721RbsD_FucU
IPR023750RbsD-like
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO:0048029monosaccharide binding
Vocabulary: Biological Process
TermDefinition
GO:0005996monosaccharide metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005996 monosaccharide metabolic process
molecular_function GO:0016853 isomerase activity
molecular_function GO:0048029 monosaccharide binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007721D-ribose pyranase RbsD/L-fucose mutarotase FucUPFAMPF05025RbsD_FucUcoord: 5..148
e-value: 2.8E-41
score: 141.0
IPR023750RbsD-like domainGENE3D3.40.1650.10coord: 2..149
e-value: 1.1E-57
score: 193.5
IPR023750RbsD-like domainSUPERFAMILY102546RbsD-likecoord: 3..148

Blast
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BLAST of TCONS_00047118-protein vs. Swiss-Prot (Human)
Match: FUCM (Fucose mutarotase OS=Homo sapiens GN=FUOM PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.578e-61
Identity = 91/149 (61.07%), Postives = 118/149 (79.19%), Query Frame = 0 
Query:    1 MVMLKNIPRVLSPELLSVLARMGHGDEIVLADANFPSASTAKAGPELIRADGHGCMEILKGVLKLLPLDMYVEAPVMLMDPTESDKVKGIKTPIWEEYKAAVNQSEGKNISVSLIERFEFYKRAEKAFAVVATGENALYGNIILKKGVL 149
            MV LK +P +LSPELL  LARMGHGDEIVLAD NFP++S  + GP  IRADG G  ++L+ VLKLLPLD YVE+P  +M+   SDK +G++TP+W EY++ + ++ G   +++ IERFEFY+RA+KAFAVVATGE ALYGN+IL+KGVL
Sbjct:    1 MVALKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVLKLLPLDTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRA-GCVRALAKIERFEFYERAKKAFAVVATGETALYGNLILRKGVL 148
The following BLAST results are available for this feature:
BLAST of TCONS_00047118-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUCM1.578e-6161.07Fucose mutarotase OS=Homo sapiens GN=FUOM PE=1 SV=... [more]
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