TCONS_00047125-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047125-protein
Unique NameTCONS_00047125-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length625

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047125-protein ID=TCONS_00047125-protein|Name=TCONS_00047125-protein|organism=Clytia hemisphaerica|type=polypeptide|length=625bp
MSSSVKHTLERLEEQQKQRLLKKKKKEENEKAEVAVKNVCKCSVEDQYDN
FDGVEDELDLKLGIKFSNLMETDDFKELQEGIRELKDENGRLNKLLGERE
EEIKIIRRRWKEDKRDLTGGGIGSDNVAAKIIEFSKKIRDLNAELGKEKS
KTLNLQRQVDQFELQKKTQEKSMKSPTKEERDKEASELSSVKDKLSQVLL
KSAEERNEIDSLKKELKIANKVLQREVGENISFQSLLNSSAGWRGRQQQI
MALQQKNNDLQQQLPQHERGKSGSTSRSISSHGQSVHDEKHRLTMRKMEL
ERKEQADKLQKELEATVQERNSLKEKNNATRARIKILSQDNKNLKERMST
LIEKGKHDDELVSALLKEQQILKADNEKLKKSKQQENSQKGERVLRASGN
FAFEEKEQHHQSLVDKLKEEMAIQENKVVQLESELKEIKTARRSQSHIPR
PPGSAAGRRNDPRRPYSGSSVPSTDTIDQQLQEFKSLNQAAGVEVERLNG
LVKLLQDRNGELVKDSLEKTIQINERKHQNAQLEKELEKTLLSQRNNKKA
SLSPRKTDPAKDLLEMETKLNIQLENNDALKEALNAALESKEEDLKVFHQ
MVEETKKIFLQGLRQYRSNAVSSAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030047XLOC_030047Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047125TCONS_00047125Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..389
NoneNo IPR availableCOILSCoilCoilcoord: 514..543
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableCOILSCoilCoilcoord: 407..441
NoneNo IPR availableCOILSCoilCoilcoord: 195..229
NoneNo IPR availableCOILSCoilCoilcoord: 295..354
NoneNo IPR availableCOILSCoilCoilcoord: 75..102
NoneNo IPR availableCOILSCoilCoilcoord: 9..37
NoneNo IPR availableCOILSCoilCoilcoord: 563..594
NoneNo IPR availableGENE3D1.10.287.510coord: 72..177
e-value: 3.5E-4
score: 20.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..475

Blast
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BLAST of TCONS_00047125-protein vs. Swiss-Prot (Human)
Match: CCD13 (Coiled-coil domain-containing protein 13 OS=Homo sapiens GN=CCDC13 PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 3.127e-72
Identity = 220/642 (34.27%), Postives = 323/642 (50.31%), Query Frame = 0 
Query:   73 DDFKELQEGIRELKDENGRLNKLLGEREEEIKIIRRRWKEDKRDLTG-GGIGSDNVAAKIIEFSKKIRDLNAELGKEKSKTLNLQRQVDQFE--LQ--------KKTQEKSMKSPTKEERDK---EASELSSVKDKLSQVLLKSAEERNEIDSLKKELKIANKVLQREVGENISFQSLLNSSAGWRGRQQQIMALQQKNNDLQQQLPQHERGKSGSTSRSISSHGQS---VHDEKHRLTMRKMELERKEQADKLQKELEATVQERNSLKEKNNATRARIKILSQDNKNLKERMSTLIEKGKHDDELVSALLKEQQILKADNEKLKKSKQQENSQKGERVLRASGNFAFEEKEQHHQSLVDKLKEEMAIQENKVVQLESEL-------------------KEIKTARRSQSHIP---RPPGSAA---GRRNDPRRPYS-----------GSSVPS--------TDTIDQ-----QLQEFKSLNQAAGVEVERLNGLVKLLQDRNGELVKDSLEKTIQINERKHQNAQLEKELEKTLL-------SQR------------NNKKASLSPRKTDPAKDLL----------EMETKLNIQLENNDALKEALNAALESKEEDLKVFHQMVEETKKIFLQGLRQYRSN 619
            D+ + L+  +RE  DENGRL KLL ER+ EIK ++++ +ED+   TG  G+  D VA KI+E SKK R L AE    K++   L  ++ + E  LQ        K   +   K P  +  D+   E  E+ +++D+L    LK ++ RN+I S+K+EL++A KVL REVGE+I+ Q LL+S   WRGR QQI+ LQ K  +L++QL Q     +G+ S  +S +         EK+ L +R +E E++E  +KL  E +   +E   LK+K    R+R K+LS + K LK +M TL+EKG+HDDEL+ AL+ +   LK   E L     QE      RV +   +     + Q   SLV +L+  +A +E KV QLE E+                   +E+  A       P   + P SA    GR    R   S             S+PS        +D+ +Q     Q+ E K+L QAA VE +RL   V +LQ R  E     LE   ++ E +H+   LE+ LEK  L       SQR            NN+       K DP+   L          E+ T+L IQ+E N+ LK AL +AL  KEED +++H+++ + K +FLQ LRQ ++ 
Sbjct:   78 DEIEHLRNELRETVDENGRLYKLLKERDFEIKHLKKKIEEDRFAFTGTAGVAGDVVATKIVELSKKNRLLMAESEGAKTRVKQLTNRIQELERELQTALTRLSAKGATDAGAKPPRAQMGDRALLETPEVKALQDRLVATNLKMSDLRNQIQSVKQELRMAQKVLAREVGEDINVQQLLSSPGTWRGRAQQILVLQSKVQELEKQLGQARSQSAGTASDELSVYPDPRKLSAQEKNLLRIRSLEREKQEGLEKLASERDVLQRELEELKKKFEGMRSRNKLLSSEMKTLKSQMGTLVEKGRHDDELIDALMDQ---LKQLQEILGSLSLQEEKT---RVSQHHLDQQLNSEAQRSNSLVAQLQAMVAEREAKVRQLEMEIGQLNVHYLRNKGVGEGSSGREVSPAYTQFLEDPGLTKSPASAGDHVGRLGSSRSVTSLGHTLVESALTRPSLPSPHRTSPRFSDSPEQKGWQAQVSEIKALWQAAEVERDRLTEFVTVLQKRVEESNSKLLESERKLQEERHRTVVLEQHLEKIRLEPGKASASQRAAPRTKTGLPTSNNRHNPTGSEKKDPSFAQLSDVPVESQMEELTTRLAIQVEENEMLKAALGSALRGKEEDFRMYHEILGQVKSVFLQALRQQKTG 713
The following BLAST results are available for this feature:
BLAST of TCONS_00047125-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD133.127e-7234.27Coiled-coil domain-containing protein 13 OS=Homo s... [more]
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