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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00047197-protein ID=TCONS_00047197-protein|Name=TCONS_00047197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1281bp
MPSKKKSIDEARSRLQEKLNEVKHKAQNLHSLIDNLSKEAVSIAEASLKE
TSKSKFLHSYPNSSQELEKCLNKFLLLSDALESLDGSDEEGEEESGEDDD
EEDEKDNISVFTTTGPSTSTAISEEENNHIVNTLTDVNLPSDIISSSTVV
TLSQYDDVSFLPNDVTLTNHDDVKARPPDVRKRTNSQDSIFSSVSMQFQS
TPMVHHKSPIALSPDISVERYKWEQGVAYPVLITNFISPWEFHLQLVNPE
NDVMEKMCITYMKDATQGYRGGIDALPSVGMFCCAKYTDETWYRAKIVDV
ISKGTITEDFKVQVYFIDEGFFSVVGSSHLRPLDEKFANMLPSQAFHCIM
GGVQPIEALQKTNKNDLGFQTCSNLWTENSKTWFQQQMDMGLFDAYFNAP
PRAAYTGPHLIGHDVITCDLFTHAPENNSKLWKFSYERPELESHLGFMLI
TKGFASHCFFFESELSRKKSQRILRETMEKLKGGEVKTQPQGACAVDDQK
PSYPNTKPDAVLDEKEKEVAINSHDSPPQNQKHDSSKQLQNQEEEKKSRP
NKNAKKRNKNKAKKASAKRNSSESDSSSSTTSCSIVTKKPLLNTEPMRIE
ILPDAKNTEKHFKDAVNPTIDVVQVRPESQGSENKASAEEEIPQITDDPQ
FESFIEDPPEEMHREKSPIEMTIVGDIEQPKFQFSTTYRELSLHVKKDTF
VKVFVSEVINPGLFYVHLVSPQVAKLDAMMERLNNFYDSKGEEIREFSQR
THYEEGIAVIARYPEDYRWYRGLIVSKCHEEEGEETEDSYNILYVDYGSN
EVAAISNILPVCKEFCELPMETIPCCLADISPTSPFISSERCEDVQVIPA
GDESSDEENDVILTEGVRKDIVPPKSPSALSKWSEISISSFKKVSLIELP
LLAALKSPQKNDNGLYEVYLYDTTNDRDLFINQFLVDEGVVTSKVFSKTT
PVVQITELELEEQLKTEGEMAVWDPMEEQYMSNRNAYSVDVNNPAVAMLG
YVEKEKNICHQYLRGRCYRGSSCRFAHVKPGDIPQSFEEVFCTDDIVTLP
DLGDWVPVTVTACLHPAHFWINLPCGSKTFSQKAIQELNLEEDPLIQLNE
TMNNFYSQVKRKDETDLTILAEGELVAACYQGDWYRARVTNTAEDLVQVF
YVDYGNTQVIGEESIRKLIPDFLHLPLQCVECTMNGVDLQVNLPQHNLIL
YNELRLKFQELTADKLLMALVVAKSPRKDLVLDVYDTSVEPHVCINKIVS
SWEGMEKVKAISNENFIKNVDGKKREFLYPG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 5..39 |
| None | No IPR available | GENE3D | 2.30.30.140 | | coord: 749..798
e-value: 1.5E-11
score: 43.3 |
| None | No IPR available | GENE3D | 2.30.30.140 | | coord: 274..321
e-value: 7.7E-15
score: 53.9
coord: 1109..1156
e-value: 1.9E-14
score: 52.6 |
| None | No IPR available | GENE3D | 4.10.1000.10 | | coord: 946..1039
e-value: 4.6E-6
score: 25.8 |
| None | No IPR available | GENE3D | 2.40.50.90 | | coord: 799..945
e-value: 6.3E-19
score: 67.8
coord: 1157..1251
e-value: 3.7E-17
score: 62.1
coord: 322..459
e-value: 1.9E-12
score: 46.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 522..589 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 481..509 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 84..121 |
| None | No IPR available | CDD | cd04508 | TUDOR | coord: 280..332
e-value: 1.62056E-11
score: 60.6895 |
| None | No IPR available | CDD | cd04508 | TUDOR | coord: 1123..1167
e-value: 7.12141E-12
score: 61.4599 |
| None | No IPR available | CDD | cd04508 | TUDOR | coord: 756..810
e-value: 2.5549E-8
score: 51.0595 |
| None | No IPR available | SUPERFAMILY | 63748 | Tudor/PWWP/MBT | coord: 257..353 |
| None | No IPR available | SUPERFAMILY | 63748 | Tudor/PWWP/MBT | coord: 1093..1187 |
| None | No IPR available | SUPERFAMILY | 63748 | Tudor/PWWP/MBT | coord: 724..830 |
| IPR002999 | Tudor domain | SMART | SM00333 | TUDOR_7 | coord: 1118..1173
e-value: 3.6E-10
score: 49.8
coord: 751..816
e-value: 2.7E-6
score: 36.9
coord: 275..338
e-value: 7.2E-8
score: 42.1 |
| IPR002999 | Tudor domain | PFAM | PF00567 | TUDOR | coord: 231..351
e-value: 7.5E-13
score: 48.5
coord: 696..828
e-value: 6.1E-21
score: 74.6
coord: 1057..1186
e-value: 1.7E-18
score: 66.7 |
| IPR002999 | Tudor domain | PROSITE | PS50304 | TUDOR | coord: 1119..1175
score: 11.691 |
| IPR002999 | Tudor domain | PROSITE | PS50304 | TUDOR | coord: 276..340
score: 12.598 |
| IPR002999 | Tudor domain | PROSITE | PS50304 | TUDOR | coord: 752..818
score: 12.981 |
| IPR000571 | Zinc finger, CCCH-type | SMART | SM00356 | c3hfinal6 | coord: 1004..1029
e-value: 7.4E-4
score: 28.8 |
| IPR000571 | Zinc finger, CCCH-type | PROSITE | PS50103 | ZF_C3H1 | coord: 1003..1030
score: 15.394 |
Blast
The following BLAST results are available for this feature:
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