TCONS_00047445-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047445-protein
Unique NameTCONS_00047445-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047445-protein ID=TCONS_00047445-protein|Name=TCONS_00047445-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MPTANFAIFILATILSHKHNGCNAQTCGHVTISQSRVINGVTSQEGQWPW
QAQIKRTVFGEQHHCGGTLIHPMYVLTAAHCLMDYRVPFHYQITLGKHDL
QTKGPNEQILMGSELKIHPMFNRRTYDNDIALIKLNKPAVLTDKVNIACI
PPNAVSPKPVLAGRNCFVSGWGLKSSTLATRYLLHGDVPIITNAECAKKM
NQVNLNGGVTDNMLCAGGDGKASCHGDSGGPLVCSESDGRFVVQGVVSWG
HPQCADGYYGVFARVDQYGGWISSILYPDKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030214XLOC_030214Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047445TCONS_00047445Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 66..81
score: 60.29
coord: 125..139
score: 46.0
coord: 221..233
score: 66.6
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 36..272
e-value: 1.2E-77
score: 274.0
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 38..272
e-value: 1.5E-61
score: 207.9
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 37..277
score: 33.384
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 37..275
e-value: 4.788E-84
score: 253.353
NoneNo IPR availableGENE3D2.40.10.10coord: 37..69
e-value: 3.3E-17
score: 61.8
NoneNo IPR availableGENE3D2.40.10.10coord: 70..133
e-value: 4.4E-24
score: 83.8
NoneNo IPR availableGENE3D2.40.10.10coord: 134..280
e-value: 1.3E-44
score: 151.5
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 222..233
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 76..81
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..276

Blast
[Close]
BLAST of TCONS_00047445-protein vs. Swiss-Prot (Human)
Match: PLMN (Plasminogen OS=Homo sapiens GN=PLG PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.964e-47
Identity = 103/244 (42.21%), Postives = 131/244 (53.69%), Query Frame = 0 
Query:   36 RVINGVTSQEGQWPWQAQIKRTVFGEQHHCGGTLIHPMYVLTAAHCLMDYRVPFHYQITLGKHDLQTKGPNEQILMGSELKIHPMFNRRTYDNDIALIKLNKPAVLTDKVNIACIPPNAVSPKPVLAGR-NCFVSGWGLKSSTLATRYLLHGDVPIITNAECAKKMNQVNLNGGVTDNMLCAG--GDGKASCHGDSGGPLVCSESDGRFVVQGVVSWGHPQCADGYYGVFARVDQYGGWISSIL 276
            RV+ G  +    WPWQ  + RT FG  H CGGTLI P +VLTAAHCL     P  Y++ LG H      P+ Q +  S L + P         DIAL+KL+ PAV+TDKV  AC+P    SP  V+A R  CF++GWG    T     L    +P+I N  C +      LNG V    LCAG    G  SC GDSGGPLVC E D ++++QGV SWG         GV+ RV ++  WI  ++
Sbjct:  580 RVVGGCVAHPHSWPWQVSL-RTRFG-MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP----SPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYE---FLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD-KYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 807
The following BLAST results are available for this feature:
BLAST of TCONS_00047445-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLMN2.964e-4742.21Plasminogen OS=Homo sapiens GN=PLG PE=1 SV=2[more]
back to top