TCONS_00047488-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047488-protein
Unique NameTCONS_00047488-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047488-protein ID=TCONS_00047488-protein|Name=TCONS_00047488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
AAAAGVTRKLPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENF
TLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLG
PNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKG
NKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASY
VSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQF
YQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFED
KDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPARE
EILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030247XLOC_030247Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047488TCONS_00047488Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023606CoA-Trfase_III_dom
IPR003673CoA-Trfase_fam_III
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023606CoA-transferase family III domainGENE3D3.40.50.10540coord: 6..393
e-value: 4.1E-108
score: 361.2
IPR023606CoA-transferase family III domainSUPERFAMILY89796CoA-transferase family III (CaiB/BaiF)coord: 10..385
IPR003673CoA-transferase family IIIPFAMPF02515CoA_transf_3coord: 12..362
e-value: 2.0E-75
score: 254.2

Blast
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BLAST of TCONS_00047488-protein vs. Swiss-Prot (Human)
Match: AMACR (Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=AMACR PE=1 SV=2)

HSP 1 Score: 409.838 bits (1052), Expect = 2.167e-142
Identity = 201/385 (52.21%), Postives = 265/385 (68.83%), Query Frame = 0 
Query:   10 LPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENFTLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLGPNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKGNKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASYVSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQFYQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFEDKDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPAREEILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL 394
            + L GI V+EL+GLAP PF  M+LADFGA+V RV+R    + +  L RGK+S+ LDLK  +G  V +RL   SDV++EPFR G+MEKL LGP  L   N RLIY RL+G+G   +   + AGHDINYLA++GVLS +G+ G  P  P+NLL DFAGG +M  +GI+MALF+R+ +GKGQV+DA++  G +Y+SSFL +++ + +W   RG N+LDGGAPFY  Y+T DG++M VGAIEPQFY+ L+KGL  + DE L  QM++ +WP+MK K  D+FA KT+ EWCQ+F+  DACVTPVL F +   H HNK  GSF+ ++E     P PAP L  TPA      +P IGEHT E L    F++ EI +L  + IIE    KASL
Sbjct:    1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGS-FCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDE-LPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQD-VSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKIIESNKVKASL 382
The following BLAST results are available for this feature:
BLAST of TCONS_00047488-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMACR2.167e-14252.21Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=A... [more]
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