TCONS_00047490-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047490-protein
Unique NameTCONS_00047490-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length328

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047490-protein ID=TCONS_00047490-protein|Name=TCONS_00047490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
MEEFLKDQYNNTQKKQQPAQQQKQAERPAESVEADIKIHMPDRTLLTIKI
SKKQRYAKIYEALVKKLGLSDFSATFFAIFEIMDKGFTRKLESNEFPYTL
FNKKYQESGTSCLVLQKWVFSIEKEIEMYEDSVAVSLLYHLAVEDIRQGR
VKPGDKIQQVKELKASNNKVKFLEVVRTLEGYCQIIFPHCQCDARRDGHV
ILAISLRHLALKACSTDGVLENIDHTFEWNEIKSWDADDEGMCFWFEYHK
AGKKPKQVKVFSPHYKYMTSCTKRIQKELEWCKKDEEGNPVLFKEEDKRS
HAKKPAKAPSAAVLPISQIEDDNDDDGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030248XLOC_030248Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047490TCONS_00047490Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000159RA_dom
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 30..121
e-value: 8.1E-17
score: 60.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableCDDcd13338FERM-like_C_SNX27coord: 184..284
e-value: 1.02903E-49
score: 162.144
IPR000159Ras-associating (RA) domainPFAMPF00788RAcoord: 36..118
e-value: 9.7E-8
score: 32.5
IPR000159Ras-associating (RA) domainPROSITEPS50200RAcoord: 32..120
score: 12.382

Blast
[Close]
BLAST of TCONS_00047490-protein vs. Swiss-Prot (Human)
Match: SNX27 (Sorting nexin-27 OS=Homo sapiens GN=SNX27 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 1.656e-75
Identity = 105/255 (41.18%), Postives = 173/255 (67.84%), Query Frame = 0 
Query:   33 EADIKIHMPDRTLLTIKISKKQRYAKIYEALVKKLGLSDFSATFFAIFEIMDKGFTRKLESNEFPYTLFNKKYQES--GTSCLVLQKWVFSIEKEIEMYEDSVAVSLLYHLAVEDIRQGRVKPGDKIQQVKELKASNNKVKFLEVVRTLEGYCQIIFPHCQCDARRDGHVILAISLRHLALKACSTDGVLENIDHTFEWNEIKSWDADDEGMCFWFEYHKAGKKPKQVKVFSPHYKYMTSCTKRIQKELEWCKKD 285
            + ++++ +PD T +T+++ K     ++Y+A+  K+G+   +  +FA+FE++   F RKL  NEFP+ L+ + Y  +  GT CL ++KW+F+ E+EI + ++ +AV+  +H AV+D+++G +K  +K  Q+++L      V +L ++RT EGY +IIFPHC CD+RR GHVI AIS+ H  L AC+ +G LEN    FEW+E++ WD D+EGM F FEY +  KKP+ VK+F+P++ YM  C +R+  EL+W K++
Sbjct:  274 DVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVISHSFVRKLAPNEFPHKLYIQNYTSAVPGT-CLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEN 527
The following BLAST results are available for this feature:
BLAST of TCONS_00047490-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX271.656e-7541.18Sorting nexin-27 OS=Homo sapiens GN=SNX27 PE=1 SV=... [more]
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