TCONS_00047526-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047526-protein
Unique Name	TCONS_00047526-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	447

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047526-protein ID=TCONS_00047526-protein|Name=TCONS_00047526-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
MLRRTTQRLLEHFEVATKAGCIRNFHMSPDGEPDRGPLDGVRVLDMSRVL
AGPYCTQLLGDMGAEVIKIERPGSGDDTRAWGPPFVGGESCYYLSINRNK
RSIVVDVKTEDGKQIIYDLAKRSDVFVENFQRGKIEKMGFGYEKLKTLNK
RLVYASISGFGAHGPDHEKPGYDMVASAVGGLMSITGPAEGRPAVAGASI
TDIMSGMYANGAICAALYERRSTNRGKRIHCSLLQTQVAYLCHIAANYLN
TGVVGKRHGSAHGSIVPYQAFETGDDHEIVVAGANDKFFKIMCEVLGLSE
LVEDSRFHTNAKRVINREELIPLLQAKLKEQPSLYWIEHFQRAGVPCGRV
NNMDDVFDMPQVKALGIVQSIPHPTAGRIKVPGPAVEYDGISQLALARHP
PLMGEHTIEILKDVLHYEETKIEELLTNNVVMEGGAHKHIKAHKYVY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030272	XLOC_030272	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047526	TCONS_00047526	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023606	CoA-Trfase_III_dom
IPR003673	CoA-Trfase_fam_III

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023606	CoA-transferase family III domain	GENE3D	3.40.50.10540		coord: 33..441 e-value: 9.5E-148 score: 491.8
IPR023606	CoA-transferase family III domain	SUPERFAMILY	89796	CoA-transferase family III (CaiB/BaiF)	coord: 36..431
IPR003673	CoA-transferase family III	PFAM	PF02515	CoA_transf_3	coord: 38..407 e-value: 9.7E-123 score: 409.8

Blast

[Close]

BLAST of TCONS_00047526-protein vs. Swiss-Prot (Human)
Match: SUCHY (Succinate--hydroxymethylglutarate CoA-transferase OS=Homo sapiens GN=SUGCT PE=1 SV=2)

HSP 1 Score: 422.55 bits (1085), Expect = 1.329e-145
Identity = 209/401 (52.12%), Postives = 281/401 (70.07%), Query Frame = 0

Query:   37 PLDGVRVLDMSRVLAGPYCTQLLGDMGAEVIKIERPGSGDDTRAWGPPFVGGESCYYLSINRNKRSIVVDVKTEDGKQIIYDLAKRSDVFVENFQRGKIEKMGFGYEKLKTLNKRLVYASISGFGAHGPDHEKPGYDMVASAVGGLMSITGPAEGRPAVAGASITDIMSGMYANGAICAALYERRSTNRGKRIHCSLLQTQVAYLCHIAANYLNTGVVGKRHGSAHGSIVPYQAFETGDDHEIVVAGANDKFFKIMCEVLGLSELVEDSRFHTNAKRVINREELIPLLQAKLKEQPSLYWIEHFQRAGVPCGRVNNMDDVFDMPQVKALGIVQSIPHPTAGRIKVPGPAVEYDGISQLALARHPPLMGEHTIEILKDVLHYEETKIEELLTNNVVMEGGAH 437
            PL+GV++LD++RVLAGP+ T  LGD+GAEVIK+ERPG+GDDTR WGPPFVG ES YYLS+NRNK+SI V++K   G +II +LA   DVFVEN+  GK+  MG GYE +  +   ++Y SI+G+G  GP  ++ GYD VASAV GLM ITGP  G P   G ++TD+ +G+YA GAI A L ++  T +G  I C+LL +QVA L HIAANYL      KR G+AHGSIVPYQAF+T D + IVV   N++ F  +C++L L EL+++S++ TN  RV NR+ELI +L  + +E+ +  W+  F+ +GVP G +NNM +VF  PQV   G+V  + HPT G+I VPGPAV Y    +++ AR PPL+G+HT  ILK+VL Y++  I ELL+  VV +   H
Sbjct:   47 PLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGY-IVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKF-KMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVVDQHETH 445

The following BLAST results are available for this feature:

BLAST of TCONS_00047526-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047526-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SUCHY	1.329e-145	52.12	Succinate--hydroxymethylglutarate CoA-transferase ...	[more]

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TCONS_00047526-protein (polypeptide) - C. hemisphaerica