TCONS_00047535-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047535-protein
Unique NameTCONS_00047535-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1054

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047535-protein ID=TCONS_00047535-protein|Name=TCONS_00047535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1054bp
MVDKMSELSRQQKLASAKKKLKKFQQAKSPATPQENGNLSQEILQGLQSN
HIFKTPALNANKKEPSINGSSNTNTNNAPTQHTANSVTQKLKFSPLNNSN
NDTSAIDLFGGPNSISKSTETVKKENVESSDVQPKNSEVEQMVASYKRSN
EQLSNQVGEQRKQILQLQEKVKESTVALQKVADQKALKEQLEVHIQTIGI
LVSEKSELQSSLTNVQKKLTTKDTEMTNLNEQFKSLQGKLLDFEKASSDF
KEAEGTLRKNNKELVTERERISTKLYEVSHQKEELNLQNSELQSKLQMKI
SECDSIMRQLNELQLHLQNGNQTNNAQSQNLQEEHMKLTKTLEEQKLIVE
RLVQDKSELLEKNHDTQSHYEEQLEHLRNQVNKAENEKQNALEQSRVLSE
SIDELQNQLNATQELEPASTPAEVIQPSIPAPLANNVDLDTIKNEKESVE
RELDIQIAENRRLSRMSVELNQKIETLETTISRLQGESLDRSSLLEQIQS
DKDTLSRALQQNKKLKEQLVELEDGFVKMSNSSADLTNKLETEQHGSKDM
AVRFSEIKIELEEAKTKLLERSRDYDNVTEELERFKEELHSAQMKLASKE
MDVDLLSTELETSQIKQQRQDLQQTTPTTPTIAENRDGNEETLILKEQLQ
AAEATIQHLNTQNDQLQIALRNMSFQKGGDTSSSEEEGDEPAELPSLPPP
TEEVDDKQPFVLDDDETSTEDSMDDMGEQNAIRISRDELKSLQQRMYALQ
QERERILNVLQDEREKTFNANERLEEHVDLKVRQLTVQRERELQEHFYGE
TEALQQKVQSLQVALEIMRKNEDIADFDMISDGITMPLLKTAFMQLQKRY
KSAMDSKANLSDRIEQLEHMNMRLESETETIGEYITLYQTQRQAMKDKFT
EKDDIINRISNEHGRMQTKVTQLHQLVMQMLSERSGYESKNKQLQELVNR
RLAQQSGEASESEVPKLQYNLDNLFGEITLTPEDETELMKDNISVNEEDI
RRDSITDQTTQQILNIFEQLETTGEGYQHGWLSPAARKHSFLPCRNCQGQ
LITL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030278XLOC_030278Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047535TCONS_00047535Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024858Golgin_A
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005794 Golgi apparatus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 801..821
NoneNo IPR availableCOILSCoilCoilcoord: 136..170
NoneNo IPR availableCOILSCoilCoilcoord: 495..525
NoneNo IPR availableCOILSCoilCoilcoord: 561..602
NoneNo IPR availableCOILSCoilCoilcoord: 328..362
NoneNo IPR availableCOILSCoilCoilcoord: 212..246
NoneNo IPR availableCOILSCoilCoilcoord: 642..669
NoneNo IPR availableCOILSCoilCoilcoord: 275..302
NoneNo IPR availableCOILSCoilCoilcoord: 439..487
NoneNo IPR availableCOILSCoilCoilcoord: 850..877
NoneNo IPR availableCOILSCoilCoilcoord: 732..777
NoneNo IPR availableCOILSCoilCoilcoord: 367..415
NoneNo IPR availableGENE3D1.20.1170.10coord: 312..593
e-value: 4.7E-10
score: 38.4
NoneNo IPR availableGENE3D1.10.287.510coord: 126..214
e-value: 0.3
score: 10.9
coord: 215..311
e-value: 3.1E-4
score: 20.5
NoneNo IPR availableGENE3D1.20.5.340coord: 834..979
e-value: 2.1E-4
score: 20.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..725
IPR024858Golgin subfamily APFAMPF15070GOLGA2L5coord: 350..1021
e-value: 4.7E-65
score: 220.4

Blast
BLAST of TCONS_00047535-protein vs. Swiss-Prot (Human)
Match: GOGA2 (Golgin subfamily A member 2 OS=Homo sapiens GN=GOLGA2 PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 2.064e-41
Identity = 177/609 (29.06%), Postives = 306/609 (50.25%), Query Frame = 0
Query:    5 MSELSRQQKLASAKKKLKKFQQAKSPATP--------QENGNLSQEILQGLQSNHIFKTPALNANKKEPS------------------INGSSNTNTNNAPT---QHTANSVTQKLK-FSPLNNSNNDTSAIDLFG-GPNSIS--KSTETVKKE---NVESSDVQPKNSEVEQMVASYKRSNEQLSNQVGEQRKQILQLQEKVKESTVALQKVADQKALKEQLEVHIQTIGILVSEKSELQSSLTNVQKKLTTKDTEMTNLNEQFKSLQGKLLDFEKASSDFKEAEGTLRKNNKELVTERERISTKLYEVSHQKEELNLQNSELQSKLQMKISECDSIMRQLNELQ-------LHLQNGNQTNNAQSQNLQ-----EEHMKLTKTLEEQKLIVERLVQDKSELLEKNHDTQSHYEEQLEHLRNQVNKAENEKQNALEQSRVLSESIDELQNQLNATQELEPASTPAEVIQPSIPAPLANNVDLDTIKNEKESVERELDIQIAENRRLSRMSVELNQKIETLETTISRLQGESLDRSSLLEQIQSDKDTLSRALQQNKKLKEQLVELEDGFVKMSNSSADLTNKLETEQHGSKDMAVRFSEIKIELEEAK 565
            MSE +RQ KLA+AKKKL+++QQ  SP  P         +NG+  +    G   +    TP  NA   +PS                  +  S N + +N P    +    S T+ L+  S   N     SA  + G GP S +  K  E+  ++    ++SS V   N ++   +   K+ N+++++Q+ E++K+  Q                 Q AL+EQL+VHIQTIGILVSEK+ELQ++L + Q     K+ E  +L  + +  + ++ + E+A S     +    + NKEL  ER+ +  +LY+ +   E+L  + SEL+ KL++ ++E   +   L ELQ       L LQ  +    A   N Q     EE  +L   L +    V +L  ++ +  E      + + ++++ +  QV+    EK+ ++ + + L  S+ EL+NQ+      EP + P+EV Q           + + ++ E E +  +L  Q+ +N  LSR++ E  +++  LE        ++  R  +LE +Q+D+ T+SRAL QN++LKEQL EL+ GFVK++N + ++T+ L++EQH  +++  +  E++ +L E K
Sbjct:   13 MSEETRQSKLAAAKKKLREYQQRNSPGVPTGAKKKKKIKNGSNPETTTSG-GCHSPEDTPKDNAATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADNVPNLMDETKTFSSTESLRQLSQQLNGLVCESATCVNGEGPASSANLKDLESRYQQLAVALDSSYV--TNKQLNITIEKLKQQNQEITDQLEEEKKECHQ----------------KQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMAEPPPPEPPAGPSEVEQ-------QLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELK 595          

HSP 2 Score: 89.7373 bits (221), Expect = 4.990e-18
Identity = 41/108 (37.96%), Postives = 73/108 (67.59%), Query Frame = 0
Query:  833 GITMPLLKTAFMQLQKRYKSAMDSKANLSDRIEQLEHMNMRLESETETIGEYITLYQTQRQAMKDKFTEKDDIINRISNEHGRMQTKVTQLHQLVMQMLSERSGYESK 940
            G T   L+ A  +LQ R+   M  KA+L +R+E+LEH  ++L  ET+TIGEYI LYQ+QR  +K++  EK++ I+R++ +   M+ K+ +L +LV++++ +R+ +  +
Sbjct:  795 GETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNEWHGR 902          
The following BLAST results are available for this feature:
BLAST of TCONS_00047535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GOGA22.064e-4129.06Golgin subfamily A member 2 OS=Homo sapiens GN=GOL... [more]
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