TCONS_00047538-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047538-protein
Unique NameTCONS_00047538-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length347

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047538-protein ID=TCONS_00047538-protein|Name=TCONS_00047538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MDVAVIGGGICGLSSAYQALSEKSLNIKQLHIYADKYQSQTTSSGAAGLW
RAANVHNTPREKLNRWGKDSLDHAIQVLSFDPDSAEKGFAPAHGFLLSRK
PIPDVQWAHFGISFVIMNEQDIRRRFPNIDPDIKYGVSFSSYTLESRRFL
SYTTIEIEKLGGKFFNQKIKSLSKLSDKYDVIINCCGLGASELVGDDKMI
PTRGQIMYVKAPWIKEFVYDIDVVDGNVPYIIPNIDRCILGGTKQQFNSS
LEPTDYDRNWILENTKKLVPSVEKAEIIEDWVGIRPGRDEIRLECEIIKA
PTTNDPKRTIPVIHNYGHGANGISLSWGCAVNVIEIMKERCGAKSSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030281XLOC_030281Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047538TCONS_00047538Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR006076FAD-dep_OxRdtase
IPR023209DAO
IPR006181D-amino_acid_oxidase_CS
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0046416D-amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003884D-amino-acid oxidase activity
GO:0071949FAD binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046416 D-amino acid metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003884 D-amino-acid oxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.9.10coord: 146..286
e-value: 4.0E-31
score: 107.0
NoneNo IPR availableSUPERFAMILY51971Nucleotide-binding domaincoord: 274..339
coord: 1..212
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 199..288
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 1..116
e-value: 8.4E-4
score: 18.5
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 2..333
e-value: 7.5E-38
score: 130.9
IPR023209D-amino-acid oxidasePIRSFPIRSF000189D-aa_oxidasecoord: 1..347
e-value: 9.3E-69
score: 230.0
IPR006181D-amino acid oxidase, conserved sitePROSITEPS00677DAOcoord: 312..330

Blast
[Close]
BLAST of TCONS_00047538-protein vs. Swiss-Prot (Human)
Match: OXDA (D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 1.052e-55
Identity = 118/344 (34.30%), Postives = 181/344 (52.62%), Query Frame = 0 
Query:    1 MDVAVIGGGICGLSSAYQALSEKSLNIKQ---LHIYADKYQSQTTSSGAAGLWRA-ANVHNTPREKLNRWGKDSLDHAIQVLSFDPDSAEKGFAPAHGFLLSRKPIPDVQWAHFGISFVIMNEQDIRRRFPNIDPDIKYGVSFSSYTLESRRFLSYTTIEIEKLGGKFFNQKIKSLSKLS-DKYDVIINCCGLGASELVGDDKMIPTRGQIMYVKAPWIKEFVYDIDVVDG--NVPYIIPNIDRCILGGTKQQFNSSLEPTDYDRNWILENTKKLVPSVEKAEIIEDWVGIRPGRDEIRLECEIIKAPTTNDPKRTIPVIHNYGHGANGISLSWGCAVNVIEIM 337
            M V VIG G+ GLS+A   + E+  ++ Q   + +YAD++   TT+  AAGLW+   +  N P+E    W + + D+ +  +   P++   G     G+ L  + IPD  W    + F  +  +++     ++ PD  YG   +S  LE + +L + T  + + G KFF +K++S  +++ +  DVI+NC G+ A  L  D  + P RGQIM V APW+K F+   D   G  N PYIIP      LGG  Q  N S      D N I E   +L P+++ A II +  G RP R +IRLE E ++   +N       VIHNYGHG  G+++ WGCA+   ++ 
Sbjct:    1 MRVVVIGAGVIGLSTAL-CIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEA--DWSQQTFDYLLSHVH-SPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPREL-----DMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGPSN-----TEVIHNYGHGGYGLTIHWGCALEAAKLF 330
The following BLAST results are available for this feature:
BLAST of TCONS_00047538-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OXDA1.052e-5534.30D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 S... [more]
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