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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00047566-protein ID=TCONS_00047566-protein|Name=TCONS_00047566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1701bp
MADQRTNLLPGNMLAFFMAMFVLYVAKEVSAVLDDGCTKNGLGLDWYLPD
DEKLPDSQITASSELPYRLAKYGRFRSPAVERIFGVWCPEKNDQKPWWQV
DFLAMRTITAIRIGSNEYADGYVTRFTLHFSYDGNDWFTVKDSKTNKSKL
YIGLDELWAKEQVALEFPVTARFFRIYPEMYHYQPCLQADFVGCKPEKTC
NKKVGVTKSSIVPNSDMTSSTFYKNHPASSGRLDAAIQPGQSQWGAWCAT
TGDIAPYLQIDLRLAREISKLETQGHPYDFMQSWVTQYAFNYSLDGQLWK
SYNQVLFGNIDGSTKKLNELKPPVIARYIRFLPKKWEGDLPCMRVEAYEC
LPRKESIPTLVYGLSDHTINRGEPLSINCLFRGLPNMTLVWNINQDYLRT
SSRIITSEVTTENEASSTLFIKRVTSAENGEISCISFYPTLQDIHAKSAG
TITVLAPIPELAIVNYTVADSVIHLNHSGPYTRDVLGYRVKVSSVDGVKD
LDFPYNDTRLATISKLRPYVTYNLQVAMRYLEDEIGPFYSSTDFETPQDK
PYGAPLNLHVTKISHDTLHATWDDPAPKLCNGPIIYYDVRYVKSDKSDPS
VRSKRAVSSNVAVFKRVFNSTAVLDRLEPGAIYEVSTRSYTKVGPGPWVH
PPELVFTGKATEELNSLKKMVITDANAAAVSNRLKNITADRTFLNKHDVV
LTLDILEKVVNKQNTSGEIGQSLVEAVSNVLKANKTVLSESEITNRTGTR
FVKMLEKWLEKLPPSEKKLEEESENVIVQKIFINKHKLEEGINFAKEDLE
KSGGVEMHIPKEAIPGNGTADSIYFVYYKKNKFFNGNKRLEELCINGFTV
FKERVFTPVVSGEVVGQTTRNLSAPVVLKFRHTEDEAKLRKTACAYWDYE
ADNEKGGWSTEGCTVESIANQTITCHCNHLTNFAAMMDVYAETSTICGKH
RKIISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFI
VVLTFVTGIEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRV
WPPRQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYGGSHYCHLTGTPLIA
SYLAPIGLIILINFVIFIFIMMKLGGRPNGNTDQNSLQLATARLRRAFGI
MILMGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARS
QWIAFFKCDGRSENKRTTDSYFSERRRMSSIGSNRTNTMQFNRLGSNASS
IQRNSIIGNGYPLSPPDKFISPPAMNTIEELESPTSPIRSFDDPPKFHPP
PSYHSPITPMEQEQPLLAINDDTIDAILEDSLDEEDEILNKKLQESEDNR
KQKQQDIKQHQKQKDIKQYSSYRALSGAKSYDVLNSVKTPSGKNLDKNTI
QRRSMEVIYRKESTNRKDLANRRSLIDMSSNRLSALSSSRDQHHVTKSME
HINKKESFRSEIPSEDIGLTGYKKIGTVAHQDKNTNNRDLKNVRPLSIDT
GTLKSDAATMTDAPPSYEPKISRQPSEKSKKDVMDWLQNCENENDLKDSD
SDYSSSFYKTSRSSSMTDMTSPTKYRHPTESTTSNHDPYDGHKKSKTDGA
IIDDFILGPLNNQTSGKDSTPNNKNNNGKQIQDILDPVGKSSDFSEEGYS
ASEEDVFDDHTRPPARRKSRGERSMNSFKRQLSVNGYVALEDKDGKPTSY
L Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
| GO:0005515 | protein binding |
| GO:0004888 | transmembrane signaling receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
| GO:0007166 | cell surface receptor signaling pathway |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007166 |
cell surface receptor signaling pathway |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0004888 |
transmembrane signaling receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1329..1363 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 937..1232
e-value: 1.0E-35
score: 122.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1343..1371 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1483..1678 |
| None | No IPR available | CDD | cd00057 | FA58C | coord: 54..188
e-value: 1.64826E-22
score: 95.4968 |
| None | No IPR available | CDD | cd00057 | FA58C | coord: 209..348
e-value: 5.16904E-28
score: 111.675 |
| None | No IPR available | CDD | cd00096 | Ig | coord: 375..435
e-value: 6.91958E-4
score: 38.6243 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 944..1220 |
| IPR000832 | GPCR, family 2, secretin-like | PRINTS | PR00249 | GPCRSECRETIN | coord: 1100..1125
score: 33.64
coord: 956..980
score: 26.92
coord: 1173..1194
score: 23.96
coord: 1020..1043
score: 26.69 |
| IPR000832 | GPCR, family 2, secretin-like | PFAM | PF00002 | 7tm_2 | coord: 954..1187
e-value: 2.3E-34
score: 118.7 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | SMART | SM00231 | disc_4 | coord: 199..350
e-value: 6.3E-9
score: 45.7
coord: 45..194
e-value: 5.6E-7
score: 39.2 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PFAM | PF00754 | F5_F8_type_C | coord: 58..184
e-value: 1.2E-14
score: 54.4
coord: 223..345
e-value: 9.8E-21
score: 74.1 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PROSITE | PS50022 | FA58C_3 | coord: 200..350
score: 29.556 |
| IPR000421 | Coagulation factor 5/8 C-terminal domain | PROSITE | PS50022 | FA58C_3 | coord: 37..194
score: 24.067 |
| IPR003961 | Fibronectin type III | SMART | SM00060 | FN3_2 | coord: 552..646
e-value: 1.7E-7
score: 40.9
coord: 457..536
e-value: 4.1
score: 14.9 |
| IPR003961 | Fibronectin type III | PFAM | PF00041 | fn3 | coord: 554..648
e-value: 1.9E-9
score: 37.6 |
| IPR003961 | Fibronectin type III | PROSITE | PS50853 | FN3 | coord: 457..549
score: 9.925 |
| IPR003961 | Fibronectin type III | PROSITE | PS50853 | FN3 | coord: 554..660
score: 16.426 |
| IPR003961 | Fibronectin type III | CDD | cd00063 | FN3 | coord: 469..546
e-value: 0.00868559
score: 35.5499 |
| IPR003961 | Fibronectin type III | CDD | cd00063 | FN3 | coord: 553..651
e-value: 1.84002E-10
score: 59.0471 |
| IPR003961 | Fibronectin type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 484..653 |
| IPR000203 | GPS motif | SMART | SM00303 | GPS_3 | coord: 890..942
e-value: 2.0E-13
score: 60.6 |
| IPR000203 | GPS motif | PFAM | PF01825 | GPS | coord: 893..934
e-value: 2.9E-14
score: 53.4 |
| IPR000203 | GPS motif | PROSITE | PS50221 | GPS | coord: 891..942
score: 15.558 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 454..547
e-value: 2.8E-5
score: 23.8 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 354..448
e-value: 1.2E-7
score: 31.2 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 548..659
e-value: 7.4E-16
score: 57.7 |
| IPR008979 | Galactose-binding domain-like | GENE3D | 2.60.120.260 | | coord: 36..197
e-value: 6.6E-26
score: 90.5
coord: 198..352
e-value: 5.0E-32
score: 110.4 |
| IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 200..350 |
| IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 51..195 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 358..453
score: 10.063 |
| IPR007110 | Immunoglobulin-like domain | SUPERFAMILY | 48726 | Immunoglobulin | coord: 358..440 |
| IPR017981 | GPCR, family 2-like | PROSITE | PS50261 | G_PROTEIN_RECEP_F2_4 | coord: 954..1195
score: 27.748 |
Blast
BLAST of TCONS_00047566-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 5.178e-61 Identity = 164/564 (29.08%), Postives = 269/564 (47.70%), Query Frame = 0
Query: 667 LKKMVITDANAAAVSNRLKNITADRTFLNKHDVVLTLDILEKVVNKQNTSGEIGQSLVEAVSNVL-KANKTVLSESEITNRTGTRFVKMLEKWLEKLPPSEKKLEEESENVIVQKIFI----NKHKLEEGINFAKEDLEKSGGVEMHIPKEAIPGNGTADSIYFVYYKKNKFFNGNKRLEELCINGF---TVFKERVFTPVVSGEVVGQTT------RNLSAPVVLKFRHTEDEAKLRKTACAYWDYEADNEKGGWSTEGCTV-ESIANQTITCHCNHLTNFAAMMDVYAETSTICGKHRKIISFITVIGCFLSLIGLFLTFLTYFMFRRLLKEMAAKVLIQLCVALFIVVLTFVTG--IEQTDKPVMCMTVAFVLHYFTLVSFFWMLMEASFMYHAFVRVWPPRQGGDIYKSTVVAWGIPLFIVGITFLTSMDNYG----GSHYCHLTGTPLI-ASYLAPIGLIILINFVIFIFIMMKLGGRPNGNTDQNSLQLATARLRRAFGIMILMGLTWAFGFGQLTDARLEFSYLFSVFNASQGFSIFIFYVTAQKRARSQWIAFFKC 1208
L + I+D NA V+ + N+ + L K + + + + + S + +++ ++ VL K N + EI+N ++++E+ K+ + + N+ V + + H + G+ F+ E+ G + I +P G SIY + N L+ + N F ++FK + T ++ VV + +NL+ PVV+ +H + CA+WD+E +N GGW++ GC V E+ N TI C C+HLT+F +MD+ ST+ + +I++ IT GC +S I L + +TY F +L K+ AK+LI LC AL ++ L F+ + K +C+T A LHYF LVSF WM +EA MY A V+V+ I K +V WGIP +V IT D YG + +C + + S +A LI L+N +F ++++L + ++ L+ + L+GLTW F F R F YLF++FN QGF IF+F+ ++ R QW C
Sbjct: 2458 LANITISDENAEDVAEHILNLINESPALGKEETKIIVSKISDISQCDEISMNLTHVMLQIINVVLEKQNNSASDLHEISNE----ILRIIERTGHKM-----EFSGQIANLTVAGLALAVLRGDHTFD-GMAFSIHSYEE--GTDPEIFLGNVPVGGILASIYLPKSLTERIPLSN--LQTILFNFFGQTSLFKTKNVTKALTTYVVSASISDDMFIQNLADPVVITLQHIGGNQNYGQVHCAFWDFENNNGLGGWNSSGCKVKETNVNYTI-CQCDHLTHFGVLMDL--SRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNYILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSV-KSQIQKTRRKMILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQIHLCC 3003
The following BLAST results are available for this feature:
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