TCONS_00047589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047589-protein
Unique NameTCONS_00047589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length409

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047589-protein ID=TCONS_00047589-protein|Name=TCONS_00047589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MEKLSWLFVFCFGLLSLYNFLQVQELRENRLQDSSEISNEDGKQRYRRDL
EENEEEDIWRFIFNREKFTKLIRRISNETYQDEIIRSLAKFVPTERLCKD
FVENCRSKEFQEKDYIIKTEHSKSGLESEKNRKFLRGPPEKSEIKTQLVV
YNTSWSDQGPVKCSARSILGEASHSGNLTVLSKPVIQNQKTLVFAPQGIN
FRFPPCEVRSNPPAKITWKRIFWSMPAGRFEVQANTLTIGNLQFSDEGFY
VCEAENFLGKDKSTLQLKVKAFEMQKTSVSSINIYPSEIANISCSALGNA
VKMDGKITKAGAAVDYKVDRSADNNTITVIASVKEKGAYVCSISNAEETL
EVAVLVHYVELGAWSSWSCNCESRKKTRNRICKNESPMKKCRAQKKETTS
CICXKMNLQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030309XLOC_030309Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047589TCONS_00047589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013098Ig_I-set
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 165..270
e-value: 5.2E-6
score: 36.0
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 196..259
e-value: 0.0047
score: 26.1
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 191..269
e-value: 7.4E-9
score: 35.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 276..357
e-value: 0.071
score: 12.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 81..209
e-value: 1.3E-9
score: 37.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 210..275
e-value: 2.8E-13
score: 49.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 184..270
score: 9.355
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 178..270
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 144..186

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top