TCONS_00047592-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047592-protein
Unique NameTCONS_00047592-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047592-protein ID=TCONS_00047592-protein|Name=TCONS_00047592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp
DHVKTCGSFPVKCTNTGCDKSFERSDKELMDKHIRDDCLFQEIKCKLYTV
GCRTKFLRGNREDHNKEEMQYHLTLLMQDYTVMKKRVEFSEGKQKILEEI
ISNQHEKIVSLTQEVEMLSKSSEAQGIGENDSTSSEIVHLKQNEVVQENQ
PIPFSCRIFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030310XLOC_030310Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047592TCONS_00047592Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 2..64
e-value: 1.0E-9
score: 38.8
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 2..56
score: 11.313
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..64
e-value: 3.6E-10
score: 39.4
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 10..90

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047592-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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