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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00047597-protein ID=TCONS_00047597-protein|Name=TCONS_00047597-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MALSTNNNNVKNDEVGYDFELLEDDRGEGLECLICTYLLKDAVELPCFHA
FCKKCLIKWEKKRQSKSVPCPSCNVEHKKNSGHSVGIVDRLIRNKLNVHC
KKNKEGCDWVGTIGDYQQQHAEVCTYTEVPCPFEGCDVAFRRKDWETHAV
ICNYRIVGCQWCSCNFKEIELELHYSECDSYPVECANEGCKQTFKRREDE
LIGKHVLVECRFQEIPCEFESAGCTKRLLRFEQANHNEAHVQHHLSLIVK
DNAKMKNKVDIAEKKQIKMEEIITKQNKKLLAVAKENERLSQIIKQTQPP
SVPNHMEKATTTKAPTAKVPTEEKAKVWGENAAVSINTAVATPPTPAKHS
SPGGATGVKENKKKDQLMFGISVSLLLSAKSDEFCLHVPDVWYIAINLED
EAVQSDLTIRFCATSNDFDYACSNWGCKVNGKHFAFQSGPYYSKLCLFKA
GFHKKSPIVYVVSENNKMVKPESSKEDFMEHHYDLNLEDFVYKEGNENWL
FLVIKLHNAK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
| GO:0008270 | zinc ion binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 32..73
e-value: 3.7E-5
score: 33.2 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 32..74
score: 12.342 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 31..76
e-value: 4.34545E-5
score: 40.1216 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 18..91
e-value: 8.4E-13
score: 47.1 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 149..189
e-value: 2.1E-4
score: 20.9
coord: 190..236
e-value: 1.8E-8
score: 34.0
coord: 92..148
e-value: 8.9E-14
score: 50.9 |
| IPR018957 | Zinc finger, C3HC4 RING-type | PFAM | PF00097 | zf-C3HC4 | coord: 32..73
e-value: 1.0E-7
score: 31.6 |
| IPR001293 | Zinc finger, TRAF-type | PFAM | PF02176 | zf-TRAF | coord: 174..236
e-value: 3.0E-9
score: 37.3 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 120..172
score: 9.664 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 174..228
score: 11.126 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 297..323 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 23..79 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 47..56 |
| IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 95..162 |
Blast
The following BLAST results are available for this feature:
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