TCONS_00047613-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047613-protein
Unique NameTCONS_00047613-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047613-protein ID=TCONS_00047613-protein|Name=TCONS_00047613-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
RELREIEEAHNKMKLQLEIKKSEARMSVYQQNQDEEGKLSEFDEITNKLP
VDESYTMNYIERLQSSIHDEKCSVNKATKNISDNDQVNLQSSDQSKSHHH
RFKSVDEPFKDKLKEAGPSVKFQVVEASHTEEMTKLVKLARAPAVKIDSF
NGNPVDFPYFIANFTQAVDENVPDERGKLTRLIDCNRGEPHELVKSCVYL
DDKDCYQQAKELLKKKYGSPHTIASEYRXELVKSCVYLDDKDCYQQAKEL
LKKKYGSPHTIASEYRKQLVLWPKLKANDTQAFDRFENYLIKYQASMRAI
GKKSQCNLELIQLLQSKMPPFLQERWNRKVYQSRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030327XLOC_030327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047613TCONS_00047613Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005312DUF1759
IPR011991WHTH_DNA-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..32
IPR005312Protein of unknown function DUF1759PFAMPF03564DUF1759coord: 241..330
e-value: 8.8E-8
score: 32.1
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 242..271
e-value: 0.19
score: 11.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047613-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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