TCONS_00047638-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047638-protein
Unique NameTCONS_00047638-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length254

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047638-protein ID=TCONS_00047638-protein|Name=TCONS_00047638-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MEQPTDAERRDLLPVSLLCGFLGAGKTTLIKHILESKHAEEGFKCAVIVN
DMAALNIDKSLIDQSALVQSDEVIAMQNGCFCCTLQSDLVDQIVSLASKN
IFNYMLIEASGVSEPAQIAPLFDLCEDEHDHEKEHPEGPELGEVARLDTC
VTVIDAAEFYNNLESMKMYEEGEMTGTISELLMEQVEYSNVVILNKQDLV
SQQQQGDILDRISLLNPKAKVLTSFQSKIDVREILNTNLYNKADMDEDSI
MCAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030341XLOC_030341Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047638TCONS_00047638Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003495CobW/HypB/UreG_dom
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003495CobW/HypB/UreG, nucleotide-binding domainPFAMPF02492cobWcoord: 14..222
e-value: 1.3E-43
score: 148.6
NoneNo IPR availableGENE3D3.40.50.300coord: 11..241
e-value: 1.1E-42
score: 145.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..246

Blast
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BLAST of TCONS_00047638-protein vs. Swiss-Prot (Human)
Match: CBWD2 (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.900e-24
Identity = 63/231 (27.27%), Postives = 126/231 (54.55%), Query Frame = 0 
Query:   13 LPVSLLCGFLGAGKTTLIKHILESKHAEEGFKCAVIVNDMA-ALNIDKSLIDQSALVQSDEVIAMQNGCFCCTLQSDLVDQIVSL-ASKNIFNYMLIEASGVSEPAQIAPLFDLCEDEHDHEKEHPEGPELGEVARLDTCVTVIDAAEFYNNLESMKMYEEGEMTGTISELLMEQVEYSNVVILNKQDLVSQQQQGDILDRISLLNPKAKVLTSFQSKIDVREILNTNLYN 241
            +PV+++ G+LGAGKTTL+ +IL  +H++   + AVI+N+      ++KSL         +E + ++NGC CC+++ + +  I +L   K  F+Y+L+E +G+++P  +A +F +               ELG    LD  +T++D+         +K   E +  G I+E    QV  ++ +++NK DLV ++    +   I  +N   ++L + +S++D+  +L+ + ++
Sbjct:   42 IPVTIITGYLGAGKTTLLNYILTEQHSK---RVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWV-------------DAELGSDIYLDGIITIVDSK------YGLKHLAEEKPDGLINE-ATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAFD 249
The following BLAST results are available for this feature:
BLAST of TCONS_00047638-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBWD24.900e-2427.27COBW domain-containing protein 2 OS=Homo sapiens G... [more]
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