TCONS_00047672-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047672-protein
Unique NameTCONS_00047672-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length921

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047672-protein ID=TCONS_00047672-protein|Name=TCONS_00047672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=921bp
MRFLLSNFLTLLLLTYSAGLSTSKIEKIEDNLDILQDDIESLLEKESRKN
DESAANTIEQFEPLSTIAKRQNGGSGDYHCSFDGDCMSDFEVKNTQSIIW
KRKIHHGHIMDRANAGSGFMFAELRYLKDKTEKAHFNTGSFPVPENQSCA
SFYYYMYGNQWQCDISRFLVYMECEGDNEPTELFRTSGNNYEDRKWRRVR
IDVNKAKGTQCKVFWRVSKGLSHTHAYIAVDDIKWATGACPTEGGPEKPE
YADCSFDSVNACEWKVSGAVPPSFSGWSTHQRGRTGPDTYFGYRSYPHGT
RGHYVYLDSRHTQYARKSLKLQSPLLRSTGKKCLKFALSMYGQTMGSVEA
FVESTDGSKQKVFSKVGHQQGKTYKWFDNAVTLPENKDYKIDLVATVGNG
TKSDIAIDNILVADGECPSGDIVLASCSFGDSGECAYTNDVCPTNESKEF
KKPEVFKPYRNSPPLTKIQKLAKEWSVSFEIKMLGTIRGWTNIIHFTTGG
NHGHRGTRIPAVFVWSNTYKLHITSAVGWHGNYQFNKVVLRKDKWTKLEI
SMKKDTDGKYYYRVLVDDVEKHKAHNSLPTEYKGVEVYAGDEWYPSTNAE
LKNFVFQNGELEPCNPVCNHNVNDPLFVPAPPAKQTFAAEQQVTRSKLLT
TLPELTKEWKVSMDVKLKSKKGGWTNIIHATTGHNCCHRGQRVPAIFVFS
NQYRSHICSPLGGYGNHNYNDIYFPQNQYTNVVMQQKKFNGQYRYQIFQN
NAIRHNVTQTKPEVFKNVKYYISDPWHNAADADVKNIVIENLVSTYPCPN
MCKGRKNKETINGTEVNTFTYDTETCENLPVRAQVNVPKHLRYGCARMMF
KLGYAAKNYCVVRFYNGGRHLHHFRNIKSGWNKVQFDLFENGSRVGLTVD
KIYSYCPMITVTDIQVTEGMC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030355XLOC_030355Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047672TCONS_00047672Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR013320ConA-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..52
NoneNo IPR availableGENE3D2.60.120.200coord: 461..614
e-value: 0.01
score: 15.4
NoneNo IPR availableGENE3D2.60.120.200coord: 250..417
e-value: 6.2E-27
score: 94.1
NoneNo IPR availableGENE3D2.60.120.200coord: 77..242
e-value: 4.7E-17
score: 61.9
IPR000998MAM domainSMARTSM00137MAM_2coord: 249..419
e-value: 1.1E-12
score: 58.2
IPR000998MAM domainPFAMPF00629MAMcoord: 80..241
e-value: 8.6E-14
score: 51.6
coord: 254..418
e-value: 1.2E-22
score: 80.4
IPR000998MAM domainPROSITEPS00740MAM_1coord: 302..342
IPR000998MAM domainPROSITEPS50060MAM_2coord: 252..419
score: 21.071
IPR000998MAM domainPROSITEPS50060MAM_2coord: 78..242
score: 16.269
IPR000998MAM domainCDDcd06263MAMcoord: 254..417
e-value: 3.48543E-22
score: 93.9817
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 252..417
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 77..240

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047672-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top