TCONS_00047676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047676-protein
Unique NameTCONS_00047676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047676-protein ID=TCONS_00047676-protein|Name=TCONS_00047676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
MSHIVDLDERELLESEKHEVDEKFKLFFDKIAGEDGEIDSFELQELFNAA
FSKELNGKSFSLEACRSMSAMTDRGQRNGTIDYEEFQHLWLHLRRYKESF
SKQDVDKSGDMCIEELGKALSRVGFDLSDRVLNICSARFANRDGKVDLDD
FIQICCRVKTSFEAFISHSGKPLSID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030359XLOC_030359Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047676TCONS_00047676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 19..171
e-value: 3.5E-26
score: 91.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 104..116
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 35..53
score: 5.252
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 91..126
score: 9.994
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 141..161
score: 6.675
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 18..167

Blast
[Close]
BLAST of TCONS_00047676-protein vs. Swiss-Prot (Human)
Match: CAN1 (Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.851e-26
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 0 
Query:    6 DLDERELLESEKHEVDEKFKLFFDKIAGEDGEIDSFELQELFNAAFSK--ELNGKSFSLEACRSMSAMTDRGQRNGTIDYEEFQHLWLHLRRYKESFSKQDVDKSGDMCIEELGKALSRVGFDLSDRVLNICSARFANRDGKVDLDDFIQICCRVKTSFEAF 165
            +L + ++L  E  E+DE FK  F ++AGED EI   EL+ + N   SK  +L  K FSLE+CRSM  + DR   NG +   EF  LW  +R Y   F K D+DKSG M   E+  A+   GF L+ ++  +   R++  D  VD D+F+    R++T F  F
Sbjct:  531 NLPDEQVLSEE--EIDENFKALFRQLAGEDMEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDR-DGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFF 689
The following BLAST results are available for this feature:
BLAST of TCONS_00047676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAN11.851e-2638.89Calpain-1 catalytic subunit OS=Homo sapiens GN=CAP... [more]
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