TCONS_00047928-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047928-protein
Unique NameTCONS_00047928-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length718

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047928-protein ID=TCONS_00047928-protein|Name=TCONS_00047928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=718bp
ISKTKILTASKKSSSYPGTPRSLKKVSVNLNNMFEDVDDECTIVPDQSTA
YQTALEDQSSAIHSSLIIQEEANKGIDSIKQMESLRHQIHSSFYPNHREI
SPGNLSDTSSVDTIALLRSTISLPSPELQLDENGILIASMNNLKSLYHSP
SSILDSSLAAENTILKENIEKERLRRKHCEDQIKILQQKLLDSQEQLAVS
VSTDRKKQIMIEQLDNTLANVVEGWKKKESLRDTAYKRVCSEKETLESTV
QRQEELLSNFENELADAVTTINDEKSKLQKQEQSFIEQIKDYSGKLKDIE
EELTKTKEENTLLSSAKEGFVKDKETLLNTHQQEMEDLRKNLMSSEALVA
KQKDELNSIGKSVQANKVEFEQQMQVVVQECHKLQIHLKDKDNTIKTLQQ
ELNERTKEKESLSVEIDLLNAKFDTLKTKQDSEMKTQLENQFNQQIQEIQ
QQISITETELRNSKKKQIVELMQQHKMEIEKYRKFYQQEMKKKEDQISKL
RTDHEQDLNKAKKQIESLSIAGQSLEKQRSDLMQRMKLMMQQHWDETVSL
ISNNQKNKMVNVDDSLSFQPLTSTFHQQHQYQHQNLATPHHNNQQPPQRL
IETHNPKQHYHQTSMQQDSVLQPSLSESQQDHHGNSMSYQHQQTPQQQSH
PRLHSPSKEPNVINRPRTSSPVDRNKRPTNQQYTDSPSSKLFTDRTLQEG
VNTSRVDANKQDPIXKKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030495XLOC_030495Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047928TCONS_00047928Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 321..355
NoneNo IPR availableCOILSCoilCoilcoord: 381..429
NoneNo IPR availableCOILSCoilCoilcoord: 243..277
NoneNo IPR availableCOILSCoilCoilcoord: 282..316
NoneNo IPR availableCOILSCoilCoilcoord: 439..466
NoneNo IPR availableCOILSCoilCoilcoord: 476..528
NoneNo IPR availableCOILSCoilCoilcoord: 169..196
NoneNo IPR availableGENE3D1.20.1170.10coord: 2..440
e-value: 4.8E-4
score: 18.6

Blast
[Close]
BLAST of TCONS_00047928-protein vs. Swiss-Prot (Human)
Match: CNTRB (Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.093e-40
Identity = 116/397 (29.22%), Postives = 222/397 (55.92%), Query Frame = 0 
Query:  165 LKENIEKERLRRKHCEDQIKILQQKLLDSQEQLAVSVSTDRKKQIMIEQLDNTLANVVEGWKKKESLRDTAYKRVCSEKETLESTVQRQEELLSNFENELADAVTTINDEK--SKLQK-QEQSFIEQIKDYSGKLKDIEEELTKTKEENTLLSSAKEGFVKDKETLLNTHQQEMEDLRKNLMSSEALVAKQKDELN----SIGKSVQANKVEFEQQMQVVVQECHKLQIHLKDKDNTIKTLQQELNERTKEKESLSVEIDLLNAKFDTLKTKQDSEMKTQLENQFNQQIQEIQQQISITETELRNSKKKQIVELMQQHKMEIEKYRKFYQQEMKKKEDQISKLRTDHEQDLNKAKKQIESLSIAGQSLEKQRSDLMQRMKLMMQQHWDETVSLISNN 554
            L++ ++ E  RRKHCE  I+ LQ ++L+ Q+QLAV+V+ DRKK  MIEQLD TLA VVEGW + E+ R    + +  E +  E T  +Q+E ++  E  L++A+  +N E+  ++LQ+ + ++  E+ +  + +L+  ++     +EE     +A+ G        L+ H +E+E LR  L       A+Q+ +L     ++ +  QA     +++ Q   Q   + Q  L    + ++ L+ EL+   +E+++L +E+ L+ A++++ + + +SE+  QLE +  +++ + Q+        LR   +KQ+ +L  QH+ E+      ++ EM ++E++  ++  D+E  L + + ++  L    Q LE+QR +L++R++ M+Q HWDE   L+S  
Sbjct:  186 LRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDTMIEQLDKTLARVVEGWNRHEAERTEVLRGLQEEHQAAELTRSKQQETVTRLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLRLEAEQQRCCVLQEER---DAARAG-------QLSEH-RELETLRAALEEERQTWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLSGQHQQELASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVCELQSGNQQLEEQRVELVERLQAMLQAHWDEANQLLSTT 571
The following BLAST results are available for this feature:
BLAST of TCONS_00047928-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTRB3.093e-4029.22Centrobin OS=Homo sapiens GN=CNTROB PE=1 SV=1[more]
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