TCONS_00047945-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047945-protein
Unique NameTCONS_00047945-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length782

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047945-protein ID=TCONS_00047945-protein|Name=TCONS_00047945-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
MTTDDNNVYQVIGNYEVVDTGKNEYLVASKGDIIIDCERVDDNWFRGKNI
RSGTYGLIPTANVVSVQQNEYREIEPELVEKLHEEGVALTTDDADTTLDD
AEDRQLLKKDQNPSSTTSRLARLGEGNYVDMSSEETLNCIDEEDEETNND
EKIPLPKRSPLPKPPRHPSVSETSKANDEGYNSASHYSGENNDSKAPLLN
DNNRTNTIPYEDEAGYEVPKINPSHELENDVAPPQKIKQRKKKKSLMMLW
KGKHGEPEAKVQTAPDEAHQNYYDPPADIRDNYFLPYSKNPTVRVALSFI
AALGISVTLFLVLLLLTKLHPVLCFSVATVIFIVLLVVPVTLYHRGIFCV
IMLLFPSLFGYRCKIVAFMLLIVFLILGPVFGTADKIHIARSCANNEDFF
YNSTVVSGTLQDDCMYKFGRIADTCSGLFNDFNRSCRTWSTPKDGYEQFL
CNQTKDFFCQTKKQAESICASTTIMTNTYNEKLEVTYTLKNIVFYLLPFL
ALMVLAEAYNYNKVYLTTKNKDNIYITQRLRELDTERRNRGLTDLILPLT
RIELYTYLVRGNVNTTKAERNRIYKWLVYLLVMVFITVCLVLIENHVDIL
LTAVLTKKCLAHYEQNNHYRYRVVIYALLGTTLFIILMQSHVLRLRSVVC
DYIYPEMVETRSKHLYYKILHDRHAFARHVRRKIQLLSEEKRLRLRISFF
SKIYNVLPTRLQWVCDKFTVRTCMICDSLSYRKTVECNENSCRAHYCFEC
HVDAGQNCLTCKVPTPTSRNSTVPAPRSSFCV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030506XLOC_030506Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047945TCONS_00047945Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012858DC_STAMP-like
IPR001452SH3_domain
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012858Dendritic cell-specific transmembrane protein-likePFAMPF07782DC_STAMPcoord: 602..666
e-value: 1.2E-7
score: 31.6
coord: 522..599
e-value: 1.8E-8
score: 34.4
NoneNo IPR availableGENE3D2.30.30.40coord: 2..571
e-value: 2.0E-5
score: 23.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..212
IPR001452SH3 domainPFAMPF00018SH3_1coord: 29..60
e-value: 7.5E-6
score: 25.4
IPR001452SH3 domainPROSITEPS50002SH3coord: 4..68
score: 10.436
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 23..69

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047945-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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