TCONS_00048630-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048630-protein
Unique NameTCONS_00048630-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length592

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048630-protein ID=TCONS_00048630-protein|Name=TCONS_00048630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MPKQVLETDIEKATSEYNVSEDWQVFMDICDRIKTMPNGPKDSLKCIMKR
VNHQIPHVALQALTLLQTCVSNCGKQFMLEVSSRDWCNNAKNVITRGHEK
VSQRLREMIKKWAEDEFKEDPQLALIGQFYKRLKQDGYGFEFGATDKPNS
TLAASLVQTPKPRSEDDVSFKEDLELAIAMSLQTADTNQGQKTSSGGSSS
AGGASSLYPTFSAPQLSYEETELFQVRALYDFEAAEDNEMTFKTGEIFAV
LDNSDENWWKGKNHLGVGLFPANFVTSDLTPPESKSEKKVRFSDVSNDQP
QSNQVVSSPQVQTQNLIVKRKTVIDENHLDSTLSMLKNASPNEVGDEEEN
IASMEDTCKEMGPLIEKKILETDRRKDDLGDLNDKFLQALQMYQQLMKEP
MVAPQPPPPQPMAHMQQMHGGHMYHSMGYQQPHSLPAAGVDPNYQYQHYG
AATQGYASLPPPQYQVTDPRQYQTSQQQPHSLDSYDANKIAKQQQSPAQQ
SHPSYALPQTQGAQPPTSQYAQTYQQPMAQQSMGNTPQGYTTQQPNYQQS
PQPQQHENYYTQQHQPAYSAGYTTGYEQQQQQPVYHQQPVFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030915XLOC_030915Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048630TCONS_00048630Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR002014VHS_dom
IPR008942ENTH_VHS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 224..234
score: 48.04
coord: 255..264
score: 33.54
coord: 238..253
score: 29.09
coord: 266..278
score: 38.01
IPR001452SH3 domainSMARTSM00326SH3_2coord: 224..279
e-value: 4.8E-20
score: 82.6
IPR001452SH3 domainPFAMPF00018SH3_1coord: 227..272
e-value: 7.4E-16
score: 57.4
IPR001452SH3 domainPROSITEPS50002SH3coord: 221..280
score: 17.151
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 209..277
IPR002014VHS domainSMARTSM00288VHS_2coord: 6..137
e-value: 2.5E-45
score: 166.6
IPR002014VHS domainPFAMPF00790VHScoord: 3..137
e-value: 1.2E-38
score: 132.0
IPR002014VHS domainPROSITEPS50179VHScoord: 13..141
score: 39.043
NoneNo IPR availableGENE3D2.30.30.40coord: 178..279
e-value: 9.1E-20
score: 70.0
NoneNo IPR availableGENE3D1.20.58.160coord: 320..403
e-value: 2.4E-4
score: 20.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..308
NoneNo IPR availableCDDcd03568VHS_STAMcoord: 6..148
e-value: 2.34322E-59
score: 195.212
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 2..154
e-value: 1.1E-39
score: 135.2
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 7..140

Blast
[Close]
BLAST of TCONS_00048630-protein vs. Swiss-Prot (Human)
Match: STAM1 (Signal transducing adapter molecule 1 OS=Homo sapiens GN=STAM PE=1 SV=3)

HSP 1 Score: 321.627 bits (823), Expect = 5.467e-103
Identity = 206/543 (37.94%), Postives = 297/543 (54.70%), Query Frame = 0 
Query:    9 DIEKATSEYNVSEDWQVFMDICDRIKTMPNGPKDSLKCIMKRVNHQIPHVALQALTLLQTCVSNCGKQFMLEVSSRDWCNNAKNVITRGHEKVSQRLREMIKKWAEDEFKEDPQLALIGQFYKRLKQDGYGFEFGATDKPNSTLAASLVQTPKPRSEDDVSFKEDLELAIAMSLQTADTNQGQKTSSGGSSSAGGASSLYPTFSAPQLSYEETELFQVRALYDFEAAEDNEMTFKTGEIFAVLDNSDENWWKGKNHLGVGLFPANFVTSDLT--PPESKSEKK-VRFSDVSNDQPQSNQVVSSPQVQTQNLIVK-RKTVIDENHLDSTLSMLKNASPNEVGDEEENIASMEDTCKEMGPLIEKKILETDRRKDDLGDLNDKFLQALQMYQQLMKEPMVAPQPPPPQPMAHMQQMHGGHMYHSMGYQQPHSLPAAGVDPNYQYQHYGAATQGYASLPPPQYQVTDPRQYQTSQQQPHSLDSYDANKIAKQQQSPAQQSHPSYALPQTQGAQPPTSQYAQTYQQPMAQQSMGNTPQGYTTQQPNY 547
            D+EKATSE N +EDW + +DICD++     GPKD L+ IM+RVNH+ PHVA+QALTLL  CVSNCGK F LEV SRD+ +   NV+ +GH KV ++L+ ++ +W  DEFK DPQL+LI    K LK+ G  F    +       A+  +    P +  +   +EDL  AI +SL+     Q Q++++         S+LYP+ S+  L+  + E  +VRA+YDFEAAEDNE+TFK GEI  VLD+SD NWWKG+ H G+GLFP+NFVT+DLT  P   K+EKK V+FSD                VQ + +  +     IDE+ +D  L ML++  P++   +   +  +E  C +MGPLI++K+ + DR+  +L +LN K ++AL +Y +LM E           PM  M         ++    QP+ + ++GV          + +Q YA  PPP          Q S  Q +SL     + +++    P+  ++P+    QTQ A P T          M     GNT   Y +Q P Y
Sbjct:   12 DVEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWT-DEFKNDPQLSLISAMIKNLKEQGVTFPAIGSQAAEQAKASPALVAKDPGTVANKKEEEDLAKAIELSLK----EQRQQSTT--------LSTLYPSTSS-LLTNHQHEGRKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTADLTAEPEMIKTEKKTVQFSD---------------DVQVETIEPEPEPAFIDEDKMDQLLQMLQSTDPSDDQPDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE----------DPMYSM---------YAKLQNQPYYMQSSGV----------SGSQVYAG-PPPSGAYLVAGNAQMSHLQSYSLPPEQLSSLSQAVVPPS--ANPALPSQQTQAAYPNT----------MVSSVQGNT---YPSQAPVY 480
The following BLAST results are available for this feature:
BLAST of TCONS_00048630-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STAM15.467e-10337.94Signal transducing adapter molecule 1 OS=Homo sapi... [more]
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