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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048804-protein ID=TCONS_00048804-protein|Name=TCONS_00048804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MNFNLFKYSIGAIFGLAAIISIVLNTLVISAVIKDPLKRLRKMFNFLLIH
LCMCDLAASFVCFPMTSYASLAFDDQKLFRTLNLVSYIGTPILNAGFFTT
ICLSYDRYKAITDPIVYRGNISTKHFLYYIGIVWVLALMTITLFFLDKLT
TLIVNTVMSFVVTVGLTIIYNRVWNALKTRGNGKTQSIVSASSNQNAENE
KRALSTCKLILLTQLTVIFFLMVTDFSIRIYYAKHTFQPSLSMRFLFNLP
MPVAAIVNPIICITRMKDFRDSIKAMFRATSNEYNFTRIKDFRDLIRAST
TIYENERFSRLNQSYVSSDIKRRQLLTGSRKQKLK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 244..270
score: 22.82
coord: 89..111
score: 25.24
coord: 44..65
score: 22.22
coord: 9..33
score: 23.05 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | SMART | SM01381 | 7TM_GPCR_Srsx_2 | coord: 18..277
e-value: 0.0022
score: -59.8 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 25..146
e-value: 1.5E-14
score: 53.8 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 4..294
e-value: 5.0E-30
score: 103.9 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 7..279 |
| IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 24..262
score: 15.076 |
Blast
The following BLAST results are available for this feature:
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