TCONS_00048806-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048806-protein
Unique NameTCONS_00048806-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048806-protein ID=TCONS_00048806-protein|Name=TCONS_00048806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
SHSANKRHRIFPIKMNNITVEMLIDSGSDLNIISQETLTKMNFEPKRFPY
KGQAKSFNAPIPFKECCYVKIRAGNSETNARFIINPHPSITILGYDSSIE
LNLLRVGPDPVATTTTTERVNNITANSSKMNDIITEYSDRFQGLGKLKGV
SLNIKTDPSIQPVAQKPRRLPILMRKEVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031025XLOC_031025Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048806TCONS_00048806Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR001969Aspartic_peptidase_AS
IPR001995Peptidase_A2_cat
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 2..103
e-value: 2.8E-12
score: 46.4
IPR021109Aspartic peptidase domainSUPERFAMILY50630Acid proteasescoord: 6..96
NoneNo IPR availablePFAMPF13975gag-asp_proteascoord: 12..96
e-value: 1.8E-6
score: 28.3
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 11..96
e-value: 1.95823E-11
score: 55.8056
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 22..33
IPR001995Peptidase A2A, retrovirus, catalyticPROSITEPS50175ASP_PROT_RETROVcoord: 20..97
score: 10.247

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048806-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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