TCONS_00048923-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048923-protein
Unique NameTCONS_00048923-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length665

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048923-protein ID=TCONS_00048923-protein|Name=TCONS_00048923-protein|organism=Clytia hemisphaerica|type=polypeptide|length=665bp
MSSCHCNYNLQTKFIRHVRRNSRMYHLASCLAAAAIGQKYFDLPWLTALA
GGAAAYILTGGWKWVRLFYLTIGRDLQLGKVFIGVEMFIRNLSKKNMVVA
DVFSETAKKFPNKPAFVSVDTGASMTYQEAEEFSNKIANIFQEAGYKKGD
VVALLMENCIEYIPIWIGLTRIGVTVSLLNYNVKGEGLKHCITVADCKAV
IYSPTLEGSLKDIESSLGNMKYYMFADSAGELDRAQSLKKLMNSASSYAP
SRHAPLSITDKMLFIYTSGTTGLPKAAVIRGTRFTFMSYAVAHAIGAKAD
DVLYNTLPLYHSNGGIGLAGQILYTGSTLVIRKKFSASRFFEDCYKHDAT
IVNYIGETCRYLLSTPPGEFDRKHKVRIATGNGLRPSIWDDFKDRFNIGM
IAEFYGATEGNANMINNTGKSGAVGYNSVLFPFVYPIKIVRIDKETGALL
RGPDGLAIPCGPGEVGELVGKVKTDAIHQFDGYVNQTATKKKIAYDVFKK
GDSAFMTGDVLYQDELGYYFFQDRMGDTFRWKGENVSTNEVEGVISKALE
LSDVCVYGVDVDGVEGKAGMVIMSDPERKVKIEDVYRLISRSLPAYACPI
FLRITTGDLEKTSTYKYKKVKLREQFYDPSLCGSDELFYFNGKEKTFLPI
TSDAFAQIKNREIRF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031077XLOC_031077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048923TCONS_00048923Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR020845AMP-binding_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 103..531
e-value: 2.0E-68
score: 230.8
NoneNo IPR availableGENE3D3.40.50.980coord: 96..269
e-value: 1.2E-35
score: 122.3
NoneNo IPR availableGENE3D3.40.50.980coord: 270..426
e-value: 5.6E-30
score: 103.6
NoneNo IPR availableGENE3D3.30.300.30coord: 526..629
e-value: 1.5E-11
score: 44.3
NoneNo IPR availableGENE3D2.30.38.10coord: 439..525
e-value: 2.3E-7
score: 30.2
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 96..628
IPR020845AMP-binding, conserved sitePROSITEPS00455AMP_BINDINGcoord: 264..275

Blast
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BLAST of TCONS_00048923-protein vs. Swiss-Prot (Human)
Match: S27A4 (Long-chain fatty acid transport protein 4 OS=Homo sapiens GN=SLC27A4 PE=1 SV=1)

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 275/640 (42.97%), Postives = 418/640 (65.31%), Query Frame = 0 
Query:   28 ASCLAAAAIGQKYFDLPWLTALAGGAAAYILTGGWKWVRLFYLTIGRDLQLGKVFIGVEMFIRNLSKKNMVVADVFSETAKKFPNKPAFVSVDTGASMTYQEAEEFSNKIANIFQEAGYKKGDVVALLMENCIEYIPIWIGLTRIGVTVSLLNYNVKGEGLKHCITVADCKAVIYSPTLEGSLKDIESSLGNMKYYMFADSAGEL----DRAQSLKKLMNSASSYAPSRHAPLSITDKMLFIYTSGTTGLPKAAVIRGTRFTFMSYAVAHAIGAKADDVLYNTLPLYHSNGGIGLAGQILYTGSTLVIRKKFSASRFFEDCYKHDATIVNYIGETCRYLLSTPPGEFDRKHKVRIATGNGLRPSIWDDFKDRFNIGMIAEFYGATEGNANMINNTGKSGAVGYNSVLFPFVYPIKIVRIDKETGALLRGPDGLAIPCGPGEVGELVGK-VKTDAIHQFDGYVNQTATKKKIAYDVFKKGDSAFMTGDVLYQDELGYYFFQDRMGDTFRWKGENVSTNEVEGVISKALELSDVCVYGVDVDGVEGKAGMVIMSDPERKVKIEDVYRLISRSLPAYACPIFLRITTGDLEKTSTYKYKKVKLREQFYDPSLCGSDELFYFNGKEKTFLPITSDAFAQIKNRE 662
            AS +      +    LPW          Y+ +GGW+++R+F  TI RD+  G V + V+  +R   ++   V  +F+ T ++ P+K A +   T    T+++ +E+S+ +AN  Q  G   GDV A+ MEN  E++ +W+G+ ++GV  +L+N N++ + L HC+T +  +A+++   +  ++ ++ +SL +    +F   + E        + L  L+  A  + PS       TDK+ +IYTSGTTGLPKAA++  +R+  M+  V +    + +D++Y+ LPLYHS G I   GQ L  G T+VIRKKFSASRF++DC K++ TIV YIGE CRYLL+ PP E + +H+VR+A GNGLR SIW +F  RF+I  +AEFYGATE N ++ N   + GA G+NS +  FVYPI++VR++++T  L+RGPDG+ IPC PGE G+LVG+ ++ D + +FDGY+NQ A  KKIA DVFKKGD A++TGDVL  DELGY +F+DR GDTFRWKGENVST EVEG +S+ L+++DV VYGV+V G EG+AGM  ++ P     +E   +++ + LP YA PIFLR+   +L KT TYK++K +LR++ +DP++   D LFY + ++  ++P+  +A+++I+  E
Sbjct:    5 ASLVGVLLFSKLVLKLPWTQVGFSLLFLYLGSGGWRFIRVFIKTIRRDIFGGLVLLKVKAKVRQCLQERRTVPILFASTVRRHPDKTALIFEGTDTHWTFRQLDEYSSSVANFLQARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEVHASL-DPSLSLFCSGSWEPGAVPPSTEHLDPLLKDAPKHLPS-CPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVIRKKFSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPREAENQHQVRMALGNGLRQSIWTNFSSRFHIPQVAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYLNQGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMADVAVYGVEVPGTEGRAGMAAVASPTGNCDLERFAQVLEKELPLYARPIFLRLLP-ELHKTGTYKFQKTELRKEGFDPAIV-KDPLFYLDAQKGRYVPLDQEAYSRIQAGE 640
The following BLAST results are available for this feature:
BLAST of TCONS_00048923-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S27A40.000e+042.97Long-chain fatty acid transport protein 4 OS=Homo ... [more]
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