TCONS_00048930-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048930-protein
Unique NameTCONS_00048930-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length468

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048930-protein ID=TCONS_00048930-protein|Name=TCONS_00048930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
MPGANCSMYGCGTSRKHKDIGIFKLPLPKDDFHRKWRQELIDIILRYRVL
DENLERQIQEDRIHICQRHFREDQFYIYPSRKLLKEGALPTLNLVPSHMN
KMVTSGRRKLSTSPNTFSTYIPTNDRVSSESTPSDEIPETSRTSPSKLWT
ERYSKGTKRTRQPGPPPLKLIHGEEDYINRPPPLEKIQDEKLYSESENMR
VNVNGEEFQYRKQSEGGTLKEFYSRRRSETFSPRPDMPLLIQDTIAIPRE
ETWRLGPHHTATTTTTTTQTNTIATSHYTPYPSYSRGASKGRGDRHFKHY
ETLNHTHRTKPYNRCDHTRTHIHDHDHIEIYHEDYSRNVKRPHLDKQRYE
GNSSDTYKRSASIDNGSQYRYTSPRHSSATDSFHRGKDPYTKRRMEDHCA
LEDDDVIVPRNFYGSNRNVEEDQHQLDTRAHHDFIDVISVEESKQKKNHH
KNSEPRPMSPVYSYLYEP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031080XLOC_031080Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048930TCONS_00048930Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006612Zinc finger, C2CH-typeSMARTSM00692dm3coord: 22..98
e-value: 0.0016
score: 27.7
IPR006612Zinc finger, C2CH-typeSMARTSM00980THAP_2coord: 4..99
e-value: 3.7E-7
score: 39.8
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 6..93
e-value: 3.8E-8
score: 34.1
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 1..93
score: 15.621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..468
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 5..97

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048930-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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